RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 PITX1P78337 314 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-208ENST00000430669 RHDQ02161 417 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 ZNF155Q12901 538 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-208ENST00000430669 SCARB2Q14108 478 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 SLC9B2Q86UD5 537 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 DNASE1L2Q92874 299 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 SCRN2Q96FV2 425 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 PYURFQ96I23 114 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 C8orf33Q9H7E9 229 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-208ENST00000430669 POP7O75817 140 aaKnown RBP11.23□□□□□ -0.61
PTCH1-208ENST00000430669 DHRS4L1P0CG22 281 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 TXNL4AP83876 142 aaKnown RBP11.23□□□□□ -0.61
PTCH1-208ENST00000430669 NDUFAF6Q330K2 333 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 SLC44A4Q53GD3 710 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 ADGRD2Q7Z7M1 963 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 CERS4Q9HA82 394 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 PLGRKTQ9HBL7 147 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 EQTNQ9NQ60 294 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 A0A1W2PRB8 838 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 NDUFS4O43181 175 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 GRID2O43424 1007 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 PRKCGP05129 697 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 ALPPP05187 535 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 ANXA8P13928 327 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 PSMA1P25786 263 aaKnown RBP11.22□□□□□ -0.61
PTCH1-208ENST00000430669 IL12AP29459 219 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 RPA4Q13156 261 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 SLC39A11Q8N1S5 342 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 ARFGAP1Q8N6T3 406 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 METTL21AQ8WXB1 218 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 OAS3Q9Y6K5 1087 aaKnown RBP11.22□□□□□ -0.61
PTCH1-208ENST00000430669 A0A096LPI6 279 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 RIIAD1A6NNX1 92 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 MEIS3P2A8K0S8 358 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 CDH3P22223 829 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 SHMT2P34897 504 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 RPL4P36578 427 aaKnown RBP11.22□□□□□ -0.61
PTCH1-208ENST00000430669 CLCNKAP51800 687 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 IL18R1Q13478 541 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 DGCR6Q14129 220 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 RTL4Q6ZR62 310 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 SCD5Q86SK9 330 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 ZFAND4Q86XD8 727 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 ENKURQ8TC29 256 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 CHID1Q9BWS9 393 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 CARS2Q9HA77 564 aaKnown RBP11.22□□□□□ -0.61
PTCH1-208ENST00000430669 PDE10AQ9Y233 779 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 POFUT2Q9Y2G5 429 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 POLR1DQ9Y2S0 133 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 MMP20O60882 483 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 KLHL22Q53GT1 634 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 ATG9BQ674R7 924 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 PDSS2Q86YH6 399 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 COX18Q8N8Q8 333 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 XAGE5Q8WWM1 108 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 TFGQ92734 400 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-208ENST00000430669 SLC2A4RGQ9NR83 387 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 CDC14AQ9UNH5 594 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 LOC285095A0A1B0GVY8 99 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 GRXCR2A6NFK2 248 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 C9P02748 559 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 GSTM2P28161 218 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 HOXC13P31276 330 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 IGFALSP35858 605 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 WASP42768 502 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 LCN1P1Q5VSP4 162 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 KANK2Q63ZY3 851 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 OAFQ86UD1 273 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 P2RY13Q9BPV8 354 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 NSUN3Q9H649 340 aaKnown RBP11.22□□□□□ -0.61
PTCH1-208ENST00000430669 GALPQ9UBC7 116 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 GTF2A1LQ9UNN4 478 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 MAN2B2Q9Y2E5 1009 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 H0YJX3 145 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 CYP4B1P13584 511 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 CDKN2DP55273 166 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 FBXO48Q5FWF7 155 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 CEP97Q8IW35 865 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 DCUN1D5Q9BTE7 237 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 BTBD1Q9H0C5 482 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 MAGIXQ9H6Y5 334 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 SMURF2Q9HAU4 748 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 TRIM39Q9HCM9 518 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 TREX1Q9NSU2 369 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 FBXW2Q9UKT8 454 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 OGDHLQ9ULD0 1010 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 FZD4Q9ULV1 537 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 CFL2Q9Y281 166 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 OR5K4A6NMS3 321 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 NME6O75414 186 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-208ENST00000430669 LYNP07948 512 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 UNC5DQ6UXZ4 953 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 DPEP2Q9H4A9 486 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 EPB41L1Q9H4G0 881 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 ANKHQ9HCJ1 492 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 CLDND1Q9NY35 253 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 DAPK2Q9UIK4 370 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 LOC730098B7Z3J9 87 aa11.22□□□□□ -0.61
PTCH1-208ENST00000430669 CAPN5O15484 640 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-208ENST00000430669 DSTNP60981 165 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms