RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 C11orf65Q8NCR3 313 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 FUBP3Q96I24 572 aaKnown RBP eCLIP13.36□□□□□ -0.27
SGMS1-203ENST00000429490 CORO1BQ9BR76 489 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 DUSP26Q9BV47 211 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 CRISPLD1Q9H336 500 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 RNF167Q9H6Y7 350 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 NEK6Q9HC98 313 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 RAD18Q9NS91 495 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 KCTD5Q9NXV2 234 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 IL37Q9NZH6 218 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 RBM47A0AV96 593 aaKnown RBP13.36□□□□□ -0.27
SGMS1-203ENST00000429490 SAGE2PA6NJ88 616 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 OR7A17O14581 309 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 NDUFB5O43674 189 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 APOL3O95236 402 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 PRAMEF12O95522 483 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 IGSF6O95976 241 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 PRPS2P11908 318 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 CD40LGP29965 261 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 CSKP41240 450 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 C1DQ13901 141 aaKnown RBP13.36□□□□□ -0.27
SGMS1-203ENST00000429490 SF3B4Q15427 424 aaKnown RBP eCLIP13.36□□□□□ -0.271e-6■■■□□ 19
SGMS1-203ENST00000429490 TIMM50Q3ZCQ8 353 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 SPATS1Q496A3 300 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 MANEALQ5VSG8 457 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 ZNF691Q5VV52 312 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 DEF8Q6ZN54 512 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 TRIM69Q86WT6 500 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 PKP4Q99569 1192 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 CLN6Q9NWW5 311 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 MOSPD1Q9UJG1 213 aa13.36□□□□□ -0.27
SGMS1-203ENST00000429490 DNAH12Q6ZR08 3092 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 ZNF831Q5JPB2 1677 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 SLC38A8A6NNN8 435 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 SULT1C4O75897 302 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 CPNE6O95741 557 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 KRT20P35900 424 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 SLC15A1P46059 708 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 VLDLRP98155 873 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 VMACQ2NL98 169 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 PYDC2Q56P42 97 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.35□□□□□ -0.27
SGMS1-203ENST00000429490 FRG2Q64ET8 278 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 TCAIMQ8N3R3 496 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 C1orf52Q8N6N3 182 aaKnown RBP13.35□□□□□ -0.27
SGMS1-203ENST00000429490 FAM83FQ8NEG4 500 aaPredicted RBP13.35□□□□□ -0.27
SGMS1-203ENST00000429490 SLC38A4Q969I6 547 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 PHF21AQ96BD5 680 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 NACC2Q96BF6 587 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 FRG2BQ96QU4 278 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 MBOAT4Q96T53 435 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 RNF38Q9H0F5 515 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 SLC32A1Q9H598 525 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 TM9SF3Q9HD45 589 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 ABT1Q9ULW3 272 aaKnown RBP13.35□□□□□ -0.27
SGMS1-203ENST00000429490 PCDHGA10Q9Y5H3 936 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 TLL1O43897 1013 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 GPC1P35052 558 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 SPAM1P38567 509 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 RAB25P57735 213 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 CATSPEREQ5SY80 951 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 TRMT11Q7Z4G4 463 aaKnown RBP13.35□□□□□ -0.27
SGMS1-203ENST00000429490 CACUL1Q86Y37 369 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 BEND7Q8N7W2 519 aaPredicted RBP13.35□□□□□ -0.27
SGMS1-203ENST00000429490 ARL14EPQ8N8R7 260 aaPredicted RBP13.35□□□□□ -0.27
SGMS1-203ENST00000429490 OR6Q1Q8NGQ2 317 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 GPR150Q8NGU9 434 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 RPRD1BQ9NQG5 326 aaKnown RBP13.35□□□□□ -0.27
SGMS1-203ENST00000429490 HEBP1Q9NRV9 189 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 TAS2R16Q9NYV7 291 aa13.35□□□□□ -0.27
SGMS1-203ENST00000429490 MTMR11A4FU01 709 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 DUSP11O75319 330 aaKnown RBP13.34□□□□□ -0.27
SGMS1-203ENST00000429490 TSPAN19P0C672 248 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 ZNF865P0CJ78 1059 aaPredicted RBP13.34□□□□□ -0.27
SGMS1-203ENST00000429490 SLC16A1P53985 500 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 SLC14A2Q15849 920 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 THOC7Q6I9Y2 204 aaKnown RBP13.34□□□□□ -0.27
SGMS1-203ENST00000429490 FUT10Q6P4F1 479 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 TMPRSS11AQ6ZMR5 421 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 USP43Q70EL4 1123 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 DEPDC4Q8N2C3 294 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 DPP10Q8N608 796 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 C19orf18Q8NEA5 215 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 ZNF675Q8TD23 568 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 LKAAEAR1Q8TD35 194 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 STARD8Q92502 1023 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 C1GALT1C1Q96EU7 318 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 GFM1Q96RP9 751 aaKnown RBP13.34□□□□□ -0.27
SGMS1-203ENST00000429490 MROQ9BYG7 248 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 ACOT13Q9NPJ3 140 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 NECTIN3Q9NQS3 549 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 BOLA1Q9Y3E2 137 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 PCDHGB3Q9Y5G1 929 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 PRSS21Q9Y6M0 314 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 TNFRSF10BO14763 440 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 PEX11BO96011 259 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 NUDT7P0C024 238 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 CD83Q01151 205 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 MRPL28Q13084 256 aaKnown RBP13.34□□□□□ -0.27
SGMS1-203ENST00000429490 NFATC2Q13469 925 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms