RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SLC6A13Q9NSD5 602 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 USE1Q9NZ43 259 aa13.27□□□□□ -0.29
THBS3-202ENST00000428962 SAMD4AQ9UPU9 718 aaKnown RBP13.27□□□□□ -0.29
THBS3-202ENST00000428962 ALPK3Q96L96 1907 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 TMEM202A6NGA9 273 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 H3BSA7 217 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 KPNA3O00505 521 aaPredicted RBP13.26□□□□□ -0.29
THBS3-202ENST00000428962 EPN2O95208 641 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 LRATO95237 230 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 CCNDBP1O95273 360 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 SERPINA1P01009 418 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 COX7A2P14406 83 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 PTPN6P29350 595 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 MAGEA10P43363 369 aaPredicted RBP13.26□□□□□ -0.29
THBS3-202ENST00000428962 ASMTP46597 345 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 BDKRB1P46663 353 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 PREPP48147 710 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 CDH15P55291 814 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 BIRC2Q13490 618 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 POM121L1PQ3SYA9 428 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 BCL7AQ4VC05 210 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 C10orf62Q5T681 223 aaPredicted RBP13.26□□□□□ -0.29
THBS3-202ENST00000428962 OR4F3Q6IEY1 312 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 TMEM220Q6QAJ8 160 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 ZNF765Q7L2R6 523 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 ZNF555Q8NEP9 628 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 OR8J2Q8NGG1 315 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 OR5K1Q8NHB7 308 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 PHOSPHO2Q8TCD6 241 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 COQ10AQ96MF6 247 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 PANX1Q96RD7 426 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 EBPLQ9BY08 206 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 REXO4Q9GZR2 422 aaKnown RBP13.26□□□□□ -0.29
THBS3-202ENST00000428962 SGK2Q9HBY8 427 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 HPS4Q9NQG7 708 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 CXXC1Q9P0U4 656 aaPredicted RBP13.26□□□□□ -0.29
THBS3-202ENST00000428962 DOCK6Q96HP0 2047 aa13.26□□□□□ -0.29
THBS3-202ENST00000428962 NUP210Q8TEM1 1887 aaPredicted RBP13.25□□□□□ -0.29
THBS3-202ENST00000428962 NOTCH4Q99466 2003 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 H3BM21 787 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 ZNF701M0R085 212 aaPredicted RBP13.25□□□□□ -0.29
THBS3-202ENST00000428962 FPGTO14772 594 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 CLIC3O95833 236 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 CD22P20273 847 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 ITGB7P26010 798 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 IMPA1P29218 277 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 CDKN2CP42773 168 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 GTF2H3Q13889 308 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 GRIN2CQ14957 1233 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 ZBED5Q49AG3 693 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 SPIN4Q56A73 249 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 DOK6Q6PKX4 331 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 EP400NLQ6ZTU2 488 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 TERB1Q8NA31 727 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 OR8D1Q8WZ84 308 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 PYURFQ96I23 114 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 PKP4Q99569 1192 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 MTG2Q9H4K7 406 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 THG1LQ9NWX6 298 aaKnown RBP13.25□□□□□ -0.29
THBS3-202ENST00000428962 HCFC2Q9Y5Z7 792 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 KCNE2Q9Y6J6 123 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 EDDM13A0A1B0GTR0 161 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 KRT87PA6NCN2 255 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 MAGEB17A8MXT2 336 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 TRMUO75648 421 aaKnown RBP13.25□□□□□ -0.29
THBS3-202ENST00000428962 GSNP06396 782 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 PBLDP30039 288 aaPredicted RBP13.25□□□□□ -0.29
THBS3-202ENST00000428962 HPCAL1P37235 193 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 HLCSP50747 726 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 VAC14Q08AM6 782 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 LRRC74AQ0VAA2 488 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 DDX39BQ13838 428 aaKnown RBP13.25□□□□□ -0.29
THBS3-202ENST00000428962 NKG7Q16617 165 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 RFX4Q33E94 735 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 NLRP8Q86W28 1048 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 HIPK1Q86Z02 1210 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 C8orf59Q8N0T1 100 aaPredicted RBP13.25□□□□□ -0.29
THBS3-202ENST00000428962 TMIEQ8NEW7 156 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 VPS37AQ8NEZ2 397 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 PJA1Q8NG27 643 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 GFM2Q969S9 779 aaKnown RBP13.25□□□□□ -0.29
THBS3-202ENST00000428962 NUS1Q96E22 293 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 DTNBP1Q96EV8 351 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 PPP1R16AQ96I34 528 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 EGLN2Q96KS0 407 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 MTERF1Q99551 399 aaKnown RBP13.25□□□□□ -0.29
THBS3-202ENST00000428962 WRAP53Q9BUR4 548 aaKnown RBP13.25□□□□□ -0.29
THBS3-202ENST00000428962 SPATA9Q9BWV2 254 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 OSBPL10Q9BXB5 764 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 ING2Q9H160 280 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 PRM3Q9NNZ6 103 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 DDX18Q9NVP1 670 aaKnown RBP13.25□□□□□ -0.29
THBS3-202ENST00000428962 IFT80Q9P2H3 777 aaPredicted RBP13.25□□□□□ -0.29
THBS3-202ENST00000428962 RPS6KA6Q9UK32 745 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 CORO2BQ9UQ03 480 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 ITM2BQ9Y287 266 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 ORC6Q9Y5N6 252 aa13.25□□□□□ -0.29
THBS3-202ENST00000428962 C5orf67F2Z3F1 127 aa13.24□□□□□ -0.29
THBS3-202ENST00000428962 SCAMP2O15127 329 aaKnown RBP13.24□□□□□ -0.29
THBS3-202ENST00000428962 E2F6O75461 281 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms