RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 RBMXL3Q8N7X1 1067 aaKnown RBP17.57■□□□□ 0.4
PSPC1-202ENST00000427943 FBXO15Q8NCQ5 510 aaPredicted RBP17.57■□□□□ 0.4
PSPC1-202ENST00000427943 C2CD4AQ8NCU7 369 aaPredicted RBP17.57■□□□□ 0.4
PSPC1-202ENST00000427943 CPT1CQ8TCG5 803 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 C10orf90Q96M02 699 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 PWWP2AQ96N64 755 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 EBNA1BP2Q99848 306 aaKnown RBP17.57■□□□□ 0.4
PSPC1-202ENST00000427943 SLC26A1Q9H2B4 701 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 WDR54Q9H977 334 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 ANKMY1Q9P2S6 941 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 TRMT6Q9UJA5 497 aaKnown RBP17.57■□□□□ 0.4
PSPC1-202ENST00000427943 FBXL4Q9UKA2 621 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 GFYI3L273 518 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 AGPSO00116 658 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 ZBTB14O43829 449 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 CCNDBP1O95273 360 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 IGHEP01854 428 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 MMP11P24347 488 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 IMPA1P29218 277 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 HSD17B2P37059 387 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 CD97P48960 835 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 PRDX1Q06830 199 aaKnown RBP17.56■□□□□ 0.4
PSPC1-202ENST00000427943 MYBPC3Q14896 1274 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 PRTGQ2VWP7 1150 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 THEMIS2Q5TEJ8 643 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 ZNF425Q6IV72 752 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 ADCK2Q7Z695 626 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 PCGF5Q86SE9 256 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 ATCAYQ86WG3 371 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 PRSS58Q8IYP2 241 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 EFCAB3Q8N7B9 438 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 Q8NA96 180 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 COL26A1Q96A83 441 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 CABS1Q96KC9 395 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 TRIM51Q9BSJ1 452 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 ZNF304Q9HCX3 659 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 CUEDC1Q9NWM3 386 aaPredicted RBP17.56■□□□□ 0.4
PSPC1-202ENST00000427943 NXT1Q9UKK6 140 aaKnown RBP17.56■□□□□ 0.4
PSPC1-202ENST00000427943 CHMP2BQ9UQN3 213 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 HS3ST3B1Q9Y662 390 aa17.56■□□□□ 0.4
PSPC1-202ENST00000427943 SCN3AQ9NY46 2000 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 SOCS6O14544 535 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 FFAR3O14843 346 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 HAT1O14929 419 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 GPR42O15529 346 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 TTC4O95801 387 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 IVDP26440 423 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 GABRB3P28472 473 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 SKIV2L2P42285 1042 aaKnown RBP17.55■□□□□ 0.4
PSPC1-202ENST00000427943 UQCRFS1P47985 274 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 CARSP49589 748 aaKnown RBP17.55■□□□□ 0.4
PSPC1-202ENST00000427943 TIAL1Q01085 375 aaKnown RBP eCLIP17.55■□□□□ 0.4
PSPC1-202ENST00000427943 MUM1Q2TAK8 710 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 HKDC1Q2TB90 917 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 CREG2Q8IUH2 290 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 PLD3Q8IV08 490 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 LRRC56Q8IYG6 542 aaPredicted RBP17.55■□□□□ 0.4
PSPC1-202ENST00000427943 CSNK1A1LQ8N752 337 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 EEF1AKMT1Q8WVE0 214 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 CERS2Q96G23 380 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 CFAP36Q96G28 342 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 MESP1Q9BRJ9 268 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 ZNF552Q9H707 407 aaPredicted RBP17.55■□□□□ 0.4
PSPC1-202ENST00000427943 PLAC1Q9HBJ0 212 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 SLAMF7Q9NQ25 335 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 ADAMTS6Q9UKP5 1117 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 PYCARDQ9ULZ3 195 aa17.55■□□□□ 0.4
PSPC1-202ENST00000427943 RUVBL1Q9Y265 456 aaKnown RBP17.55■□□□□ 0.4
PSPC1-202ENST00000427943 PRRC2CQ9Y520 2896 aaKnown RBP17.55■□□□□ 0.4
PSPC1-202ENST00000427943 EZRP15311 586 aaKnown RBP17.54■□□□□ 0.4
PSPC1-202ENST00000427943 FBLP22087 321 aaKnown RBP17.54■□□□□ 0.4
PSPC1-202ENST00000427943 ITGA3P26006 1051 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 ELK3P41970 407 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 CDKN2DP55273 166 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 TBPL1P62380 186 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 DR1Q01658 176 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 KLC1Q07866 573 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 RBBP7Q16576 425 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 UGT3A1Q6NUS8 523 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 PRMT9Q6P2P2 845 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 MBOAT1Q6ZNC8 495 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 HPS6Q86YV9 775 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 GABPB2Q8TAK5 448 aaPredicted RBP17.54■□□□□ 0.4
PSPC1-202ENST00000427943 STT3BQ8TCJ2 826 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 NAPGQ99747 312 aaPredicted RBP17.54■□□□□ 0.4
PSPC1-202ENST00000427943 WDR83Q9BRX9 315 aaKnown RBP17.54■□□□□ 0.4
PSPC1-202ENST00000427943 NAT9Q9BTE0 207 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 CRB3Q9BUF7 120 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 ATP13A2Q9NQ11 1180 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 PPANQ9NQ55 473 aaKnown RBP17.54■□□□□ 0.4
PSPC1-202ENST00000427943 TAS2R13Q9NYV9 303 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 C5AR2Q9P296 337 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 MAP10Q9P2G4 905 aa17.54■□□□□ 0.4
PSPC1-202ENST00000427943 VSTM2BA6NLU5 285 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 EIF3FO00303 357 aaPredicted RBP17.53■□□□□ 0.4
PSPC1-202ENST00000427943 P2RX6O15547 441 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 TTI1O43156 1089 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 VPS4BO75351 444 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 AHSGP02765 367 aa17.53■□□□□ 0.4
PSPC1-202ENST00000427943 STATHP02808 62 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms