RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 PSMB7Q99436 277 aa5.45□□□□□ -1.54
C9orf3-205ENST00000427193 PIMREGQ9BSJ6 248 aa5.45□□□□□ -1.54
C9orf3-205ENST00000427193 FRMD8P1Q9BZ68 369 aaPredicted RBP5.45□□□□□ -1.54
C9orf3-205ENST00000427193 PLA2G2FQ9BZM2 168 aa5.45□□□□□ -1.54
C9orf3-205ENST00000427193 ZYG11BQ9C0D3 744 aa5.45□□□□□ -1.54
C9orf3-205ENST00000427193 LINC00597Q9H2U6 94 aa5.45□□□□□ -1.54
C9orf3-205ENST00000427193 DHX35Q9H5Z1 703 aaKnown RBP5.45□□□□□ -1.54
C9orf3-205ENST00000427193 PDFQ9HBH1 243 aa5.45□□□□□ -1.54
C9orf3-205ENST00000427193 TRPV5Q9NQA5 729 aa5.45□□□□□ -1.54
C9orf3-205ENST00000427193 HPS4Q9NQG7 708 aa5.45□□□□□ -1.54
C9orf3-205ENST00000427193 TBC1D14Q9P2M4 693 aa5.45□□□□□ -1.54
C9orf3-205ENST00000427193 PCYOX1Q9UHG3 505 aa5.45□□□□□ -1.54
C9orf3-205ENST00000427193 CLEC4EQ9ULY5 219 aa5.45□□□□□ -1.54
C9orf3-205ENST00000427193 PCDHGA5Q9Y5G8 931 aa5.45□□□□□ -1.54
C9orf3-205ENST00000427193 ABCA12Q86UK0 2595 aa5.45□□□□□ -1.54
C9orf3-205ENST00000427193 DOCK4Q8N1I0 1966 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 A0A1B0GVM2 712 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 BCLAF3A2AJT9 711 aaKnown RBP5.44□□□□□ -1.54
C9orf3-205ENST00000427193 HEPACAM2A8MVW5 462 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 CCDC188H7C350 402 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 LIASO43766 372 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 MFSD11O43934 449 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 CACNG3O60359 315 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 CLDN11O75508 207 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 PAPSS2O95340 614 aaPredicted RBP5.44□□□□□ -1.54
C9orf3-205ENST00000427193 PRB1P04280 392 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 ENO1P06733 434 aaKnown RBP5.44□□□□□ -1.54
C9orf3-205ENST00000427193 CISD3P0C7P0 127 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 DESP17661 470 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 CSRP1P21291 193 aaKnown RBP5.44□□□□□ -1.54
C9orf3-205ENST00000427193 CHKAP35790 457 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 FNTAP49354 379 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 NDST2P52849 883 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 CDH4P55283 916 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 YBEYP58557 167 aaPredicted RBP5.44□□□□□ -1.54
C9orf3-205ENST00000427193 RPS24P62847 133 aaKnown RBP5.44□□□□□ -1.54
C9orf3-205ENST00000427193 PPIDQ08752 370 aaKnown RBP5.44□□□□□ -1.54
C9orf3-205ENST00000427193 WASHC5Q12768 1159 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 SEMA5AQ13591 1074 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 GBX1Q14549 363 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 PPP6R3Q5H9R7 873 aaPredicted RBP5.44□□□□□ -1.54
C9orf3-205ENST00000427193 RAP1GAP2Q684P5 730 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 TLDC1Q6P9B6 456 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 RFWD3Q6PCD5 774 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 PARM1Q6UWI2 310 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 MTSS1LQ765P7 747 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 SETD3Q86TU7 594 aaPredicted RBP5.44□□□□□ -1.54
C9orf3-205ENST00000427193 TMEM25Q86YD3 366 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 NOA1Q8NC60 698 aaKnown RBP5.44□□□□□ -1.54
C9orf3-205ENST00000427193 OR52L2PQ8NGH6 319 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 FIBINQ8TAL6 211 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 ACTL9Q8TC94 416 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 WFDC5Q8TCV5 224 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 ING5Q8WYH8 240 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 TADA1Q96BN2 335 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 TBC1D31Q96DN5 1066 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 NAP1L3Q99457 506 aaPredicted RBP5.44□□□□□ -1.54
C9orf3-205ENST00000427193 HEMGNQ9BXL5 484 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 CALN1Q9BXU9 219 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 TRIM2Q9C040 744 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 RBM38Q9H0Z9 239 aaKnown RBP5.44□□□□□ -1.54
C9orf3-205ENST00000427193 ARRDC1-AS1Q9H2J1 176 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 TRPC7Q9HCX4 862 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 HOMER3Q9NSC5 361 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 MPP6Q9NZW5 540 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 SLC12A6Q9UHW9 1150 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 KLK13Q9UKR3 277 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 INTS6Q9UL03 887 aaKnown RBP5.44□□□□□ -1.54
C9orf3-205ENST00000427193 VANGL2Q9ULK5 521 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 ICKQ9UPZ9 632 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 SHROOM3Q8TF72 1996 aa5.44□□□□□ -1.54
C9orf3-205ENST00000427193 NUP210Q8TEM1 1887 aaPredicted RBP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 SYNJ2BP-COX16A0A087WUM0 186 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 ILVBLA1L0T0 632 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 HACD1B0YJ81 288 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 F5H5T6 163 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 SLC9A3R1O14745 358 aaPredicted RBP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 CHADO15335 359 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 CREB3O43889 395 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 COQ9O75208 318 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 LUC7L3O95232 432 aaKnown RBP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 MOCS2O96007 188 aaPredicted RBP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 HMBSP08397 361 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 PSMC3P17980 439 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 MT3P25713 68 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 HLA-FP30511 346 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 HOXA6P31267 233 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 SLC5A2P31639 672 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 ARRB2P32121 409 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 CHRNA3P32297 505 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 COILP38432 576 aaPredicted RBP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 GARSP41250 739 aaKnown RBP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 MAGEA6P43360 314 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 IFNAR2P48551 515 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 DNA2P51530 1060 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 DRG2P55039 364 aaKnown RBP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 TPI1P60174 286 aa5.43□□□□□ -1.54
C9orf3-205ENST00000427193 IFI35P80217 286 aaPredicted RBP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 OTUD4Q01804 1114 aaKnown RBP5.43□□□□□ -1.54
C9orf3-205ENST00000427193 KRT81Q14533 505 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms