RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 PSMD8P48556 350 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 WDSUB1Q8N9V3 476 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 TLCD1Q96CP7 247 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 EBF3Q9H4W6 596 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 RGCCQ9H4X1 137 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 FAM105AQ9NUU6 356 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 SLC39A1Q9NY26 324 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 H7C417 338 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 IFNA10P01566 189 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 CSNK2A2P19784 350 aaPredicted RBP14.1□□□□□ -0.15
PTPN13-203ENST00000427191 ADCYAP1R1P41586 468 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 ZNF781Q8N8C0 355 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 CAMKVQ8NCB2 501 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 BPIFB1Q8TDL5 484 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 ATRNO75882 1429 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 PCDH7O60245 1069 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 CAPSQ13938 189 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 SERPINA9Q86WD7 417 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 BANPQ8N9N5 519 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 LRRC46Q96FV0 321 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 SLC35A5Q9BS91 424 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 RIMBP3CA6NJZ7 1639 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 RIMBP3BA6NNM3 1639 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 RIMBP3Q9UFD9 1639 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 TECPR2O15040 1411 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 TREHO43280 583 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 RNASEH2AO75792 299 aaKnown RBP14.1□□□□□ -0.15
PTPN13-203ENST00000427191 CCNHP51946 323 aaPredicted RBP14.1□□□□□ -0.15
PTPN13-203ENST00000427191 POU4F2Q12837 409 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 HMBOX1Q6NT76 420 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 C12orf40Q86WS4 652 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 ZSCAN5AQ9BUG6 496 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 POTEKPQ9BYX7 375 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 A0A1W2PQH9 124 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 MFSD11O43934 449 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 SLITRK5O94991 958 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 PCCBP05166 539 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 ITGA5P08648 1049 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 HTR1AP08908 422 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 TACR2P21452 398 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 IFNL1Q8IU54 200 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 REM2Q8IYK8 340 aaPredicted RBP14.1□□□□□ -0.15
PTPN13-203ENST00000427191 CNTN3Q9P232 1028 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 SH3PXD2BA1X283 911 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 NFE2L1Q14494 772 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 ZNF404Q494X3 552 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 CATSPERGQ6ZRH7 1159 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 GALNT12Q8IXK2 581 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 MAFFQ9ULX9 164 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 MRPL49Q13405 166 aaKnown RBP14.1□□□□□ -0.15
PTPN13-203ENST00000427191 NBPF12Q5TAG4 269 aaPredicted RBP14.1□□□□□ -0.15
PTPN13-203ENST00000427191 MAP1SQ66K74 1059 aaPredicted RBP14.1□□□□□ -0.15
PTPN13-203ENST00000427191 AMZ2Q86W34 360 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 FAM46DQ8NEK8 389 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 ATP6V1C2Q8NEY4 427 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 TRIM43Q96BQ3 446 aaPredicted RBP14.1□□□□□ -0.15
PTPN13-203ENST00000427191 ACTR3BQ9P1U1 418 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 GABRR2P28476 465 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 ITPK1Q13572 414 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 HFE2Q6ZVN8 426 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 MRPL41Q8IXM3 137 aaKnown RBP14.1□□□□□ -0.15
PTPN13-203ENST00000427191 LSM14AQ8ND56 463 aaKnown RBP14.1□□□□□ -0.15
PTPN13-203ENST00000427191 CD300LFQ8TDQ1 290 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 CPT1BQ92523 772 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 LRRC58Q96CX6 371 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 ADAD1Q96M93 576 aaKnown RBP14.1□□□□□ -0.15
PTPN13-203ENST00000427191 ACBD6Q9BR61 282 aa14.1□□□□□ -0.15
PTPN13-203ENST00000427191 HYKKA2RU49 373 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 OR12D2P58182 307 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 PLA2G4EQ3MJ16 856 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 CHST9Q7L1S5 443 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 RIPOR3Q96MK2 946 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 DGAT2Q96PD7 388 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 TAS2R3Q9NYW6 316 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 VPS29Q9UBQ0 182 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 LOC100130705A0A1B0GUX0 176 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 FOSL1P15407 271 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 IMPDH1P20839 514 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 DHCR24Q15392 516 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 TARBP2Q15633 366 aaKnown RBP14.09□□□□□ -0.15
PTPN13-203ENST00000427191 CCDC88AQ3V6T2 1871 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 PIGWQ7Z7B1 504 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 UPF1Q92900 1129 aaKnown RBP eCLIP14.09□□□□□ -0.15
PTPN13-203ENST00000427191 VRK1Q99986 396 aaPredicted RBP14.09□□□□□ -0.15
PTPN13-203ENST00000427191 ABCG8Q9H221 673 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 CLCA3PQ9Y6N3 262 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 FER1L4A9Z1Z3 1794 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 GOT2P00505 430 aaKnown RBP14.09□□□□□ -0.15
PTPN13-203ENST00000427191 CDK2P24941 298 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 CD83Q01151 205 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 TOR1AIP1Q5JTV8 583 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 SHQ1Q6PI26 577 aaKnown RBP14.09□□□□□ -0.15
PTPN13-203ENST00000427191 ZBTB46Q86UZ6 589 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 LGI4Q8N135 537 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 CHCHD4Q8N4Q1 142 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 FAM120CQ9NX05 1096 aaKnown RBP14.09□□□□□ -0.15
PTPN13-203ENST00000427191 C19orf25Q9UFG5 118 aaPredicted RBP14.09□□□□□ -0.15
PTPN13-203ENST00000427191 MYH13Q9UKX3 1938 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 HCKP08631 526 aa14.09□□□□□ -0.15
PTPN13-203ENST00000427191 BCKDHAP12694 445 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms