RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 SERPINA1P01009 418 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 HNRNPCP07910 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
RPL28-202ENST00000426763 GIMD1P0DJR0 217 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 ATF6P18850 670 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 CDK9P50750 372 aaKnown RBP13.49□□□□□ -0.25
RPL28-202ENST00000426763 FOLH1Q04609 750 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 TP53INP2Q8IXH6 220 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 ZNF527Q8NB42 609 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 OR52J3Q8NH60 311 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 SHKBP1Q8TBC3 707 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 LMAN1LQ9HAT1 526 aa13.49□□□□□ -0.25
RPL28-202ENST00000426763 PEX12O00623 359 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 CDH12P55289 794 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 DSTNP60981 165 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 COX10Q12887 443 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 PCLAFQ15004 111 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 SNAPC1Q16533 368 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 FAM91A1Q658Y4 838 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 OR4F3Q6IEY1 312 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 ISLR2Q6UXK2 745 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 ANKRD33Q7Z3H0 272 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 RHEBL1Q8TAI7 183 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 SUN3Q8TAQ9 357 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 RTP4Q96DX8 246 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 TCEAL4Q96EI5 215 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 TPSD1Q9BZJ3 242 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 TBL1XR1Q9BZK7 514 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 REXO4Q9GZR2 422 aaKnown RBP13.48□□□□□ -0.25
RPL28-202ENST00000426763 LYARQ9NX58 379 aaKnown RBP13.48□□□□□ -0.25
RPL28-202ENST00000426763 KCNJ13O60928 360 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 NCK1P16333 377 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 BPIP17213 487 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 FAM214AQ32MH5 1076 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 MZT2AQ6P582 158 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 TMEM126BQ8IUX1 230 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 ZNF347Q96SE7 839 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 CRISPLD1Q9H336 500 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 STMN3Q9NZ72 180 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 RIIAD1A6NNX1 92 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 MYCLP1P12525 358 aaPredicted RBP13.48□□□□□ -0.25
RPL28-202ENST00000426763 CD1DP15813 335 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 EEFSECP57772 596 aaKnown RBP13.48□□□□□ -0.25
RPL28-202ENST00000426763 RAPSNQ13702 412 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 LIPJQ5W064 366 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 CRTC1Q6UUV9 634 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 CYS1Q717R9 158 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 GALNT5Q7Z7M9 940 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 GIPC3Q8TF64 312 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 XKR8Q9H6D3 395 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 IL1RAPQ9NPH3 570 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 ABCA3Q99758 1704 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 JMJD7P0C870 316 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 RABIFP47224 123 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 C1orf61Q13536 156 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 DUOXA1Q1HG43 343 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 EMC10Q5UCC4 262 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 ZHX1-C8orf76Q96EF9 292 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 CENPNQ96H22 339 aaPredicted RBP13.48□□□□□ -0.25
RPL28-202ENST00000426763 CIB1Q99828 191 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 GPATCH1Q9BRR8 931 aaKnown RBP13.48□□□□□ -0.25
RPL28-202ENST00000426763 DCUN1D5Q9BTE7 237 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 NOL6Q9H6R4 1146 aaKnown RBP13.48□□□□□ -0.25
RPL28-202ENST00000426763 NEUROD4Q9HD90 331 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 FADS3Q9Y5Q0 445 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 HIDE1A8MVS5 230 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 CLIC1O00299 241 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 NME6O75414 186 aaPredicted RBP13.48□□□□□ -0.25
RPL28-202ENST00000426763 ABATP80404 500 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 OC90Q02509 493 aaPredicted RBP13.48□□□□□ -0.25
RPL28-202ENST00000426763 ZNF234Q14588 700 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 ZDHHC21Q8IVQ6 265 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 SVOPLQ8N434 492 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 HCAR2Q8TDS4 363 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 OR52B2Q96RD2 323 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 ZNF382Q96SR6 550 aa13.48□□□□□ -0.25
RPL28-202ENST00000426763 H7BY64 318 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 SLC6A4P31645 630 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 GRK6P43250 576 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 HNRNPKP61978 463 aaKnown RBP eCLIP13.47□□□□□ -0.256e-6■□□□□ 10
RPL28-202ENST00000426763 TCEAL5Q5H9L2 206 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 SPANXN2Q5MJ10 180 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 PRAP1Q96NZ9 151 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 NUAK2Q9H093 628 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 ZNF334Q9HCZ1 680 aaPredicted RBP13.47□□□□□ -0.25
RPL28-202ENST00000426763 FZD4Q9ULV1 537 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 TESMINQ9Y4I5 508 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 TRIM43BA6NCK2 446 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 hCG_2039718K7EN88 272 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 B4GALT2O60909 372 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 ARMC4Q5T2S8 1044 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 STEAP4Q687X5 459 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 ISG20Q96AZ6 181 aaKnown RBP13.47□□□□□ -0.25
RPL28-202ENST00000426763 FZD3Q9NPG1 666 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 DUX1O43812 170 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 MAPK10P53779 464 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 FAM189BP81408 668 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 EMX2Q04743 252 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 SLC36A4Q6YBV0 504 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 TSPAN33Q86UF1 283 aa13.47□□□□□ -0.25
RPL28-202ENST00000426763 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms