RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 IGKV2-30P06310 120 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 IRF2P14316 349 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 ITIH1P19827 911 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 MNDAP41218 407 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 CASP3P42574 277 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 FRKP42685 505 aaPredicted RBP4.42□□□□□ -1.7
LINC00400-201ENST00000425609 CDX1P47902 265 aaPredicted RBP4.42□□□□□ -1.7
LINC00400-201ENST00000425609 PDX1P52945 283 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 B3GALT5-AS1P59052 145 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 STX1BP61266 288 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 ST8SIA6P61647 398 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 PITX1P78337 314 aaPredicted RBP4.42□□□□□ -1.7
LINC00400-201ENST00000425609 ACTN3Q08043 901 aaPredicted RBP4.42□□□□□ -1.7
LINC00400-201ENST00000425609 AP1B1Q10567 949 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 KIF19Q2TAC6 998 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 C2orf76Q3KRA6 126 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 ITPRIPL2Q3MIP1 535 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 KBTBD12Q3ZCT8 623 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 ASPRV1Q53RT3 343 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 CCDC158Q5M9N0 1113 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 SPOUT1Q5T280 376 aaKnown RBP4.42□□□□□ -1.7
LINC00400-201ENST00000425609 IRAK1BP1Q5VVH5 260 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 C9orf57Q5W0N0 161 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 ZNF449Q6P9G9 518 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.42□□□□□ -1.7
LINC00400-201ENST00000425609 RBM23Q86U06 439 aaKnown RBP4.42□□□□□ -1.7
LINC00400-201ENST00000425609 TMEM139Q8IV31 216 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 SIAH3Q8IW03 269 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 AMER3Q8N944 861 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 OR2T12Q8NG77 320 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 PIGBQ92521 554 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 P2RX5Q93086 422 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 SNRNP40Q96DI7 357 aaKnown RBP4.42□□□□□ -1.7
LINC00400-201ENST00000425609 MYADMQ96S97 322 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 HNRNPABQ99729 332 aaKnown RBP4.42□□□□□ -1.7
LINC00400-201ENST00000425609 TM6SF1Q9BZW5 370 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 S1PR5Q9H228 398 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 SLC38A7Q9NVC3 462 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 KNSTRNQ9Y448 316 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 JRKLQ9Y4A0 524 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 PCDHGA1Q9Y5H4 931 aa4.42□□□□□ -1.7
LINC00400-201ENST00000425609 CROCC2H7BZ55 1655 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 RIMS2Q9UQ26 1411 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 SDR42E2A6NKP2 422 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 FLRT2O43155 660 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 SMAD6O43541 496 aaKnown RBP4.41□□□□□ -1.7
LINC00400-201ENST00000425609 RTN2O75298 545 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 ALPLP05186 524 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 SNRNP70P08621 437 aaKnown RBP4.41□□□□□ -1.7
LINC00400-201ENST00000425609 CDK4P11802 303 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 PLA2G2AP14555 144 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 CDKN2AP42771 156 aaKnown RBP4.41□□□□□ -1.7
LINC00400-201ENST00000425609 KHKP50053 298 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 SNU13P55769 128 aaKnown RBP4.41□□□□□ -1.7
LINC00400-201ENST00000425609 GAGE5Q13069 117 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 GAGE6Q13070 117 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 UGP2Q16851 508 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 CYP4A22Q5TCH4 519 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 ZNF772Q68DY9 489 aaPredicted RBP4.41□□□□□ -1.7
LINC00400-201ENST00000425609 CASC4Q6P4E1 433 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 CORO6Q6QEF8 472 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 TMEM270Q6UE05 265 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 PRSS55Q6UWB4 352 aaPredicted RBP4.41□□□□□ -1.7
LINC00400-201ENST00000425609 BTNL8Q6UX41 500 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 ANKRD33Q7Z3H0 272 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 PLD3Q8IV08 490 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 FOXP4Q8IVH2 680 aaPredicted RBP4.41□□□□□ -1.7
LINC00400-201ENST00000425609 C4orf19Q8IY42 314 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 RYBPQ8N488 228 aaPredicted RBP4.41□□□□□ -1.7
LINC00400-201ENST00000425609 CHCHD4Q8N4Q1 142 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 OR4K1Q8NGD4 311 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 ZNF473Q8WTR7 871 aaKnown RBP4.41□□□□□ -1.7
LINC00400-201ENST00000425609 SEPT1Q8WYJ6 367 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 HSD17B8Q92506 261 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 SLC47A1Q96FL8 570 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 THOC1Q96FV9 657 aaKnown RBP4.41□□□□□ -1.7
LINC00400-201ENST00000425609 CCDC43Q96MW1 224 aaKnown RBP4.41□□□□□ -1.7
LINC00400-201ENST00000425609 IL17FQ96PD4 163 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 RTP3Q9BQQ7 232 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 LRRC1Q9BTT6 524 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 TRAF4Q9BUZ4 470 aaPredicted RBP4.41□□□□□ -1.7
LINC00400-201ENST00000425609 DDX31Q9H8H2 851 aaKnown RBP4.41□□□□□ -1.7
LINC00400-201ENST00000425609 MID1IP1Q9NPA3 183 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 A4GALTQ9NPC4 353 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 CD93Q9NPY3 652 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 GSN-AS1Q9NRJ2 163 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 SPHK1Q9NYA1 384 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 SLCO1C1Q9NYB5 712 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 PIK3C2BO00750 1634 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 NKTRP30414 1462 aaKnown RBP4.41□□□□□ -1.7
LINC00400-201ENST00000425609 TET3O43151 1660 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 ADGRB3O60242 1522 aa4.41□□□□□ -1.7
LINC00400-201ENST00000425609 NUP155O75694 1391 aa4.4□□□□□ -1.7
LINC00400-201ENST00000425609 CFAP65Q6ZU64 1925 aaKnown RBP4.4□□□□□ -1.7
LINC00400-201ENST00000425609 JCADQ9P266 1359 aa4.4□□□□□ -1.7
LINC00400-201ENST00000425609 IGLV5-45A0A087WSX0 123 aa4.4□□□□□ -1.71
LINC00400-201ENST00000425609 A0A1W2PRV1 198 aa4.4□□□□□ -1.71
LINC00400-201ENST00000425609 A0A1W2PS18 150 aa4.4□□□□□ -1.71
LINC00400-201ENST00000425609 DDX39AO00148 427 aaKnown RBP4.4□□□□□ -1.71
LINC00400-201ENST00000425609 GH1P01241 217 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms