RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 NMRK1Q9NWW6 199 aa25.59■■□□□ 1.69
LDB1-202ENST00000425280 CA5BQ9Y2D0 317 aa25.59■■□□□ 1.69
LDB1-202ENST00000425280 DNAJA2O60884 412 aa25.59■■□□□ 1.69
LDB1-202ENST00000425280 ETHE1O95571 254 aa25.59■■□□□ 1.69
LDB1-202ENST00000425280 IL6P05231 212 aa25.59■■□□□ 1.69
LDB1-202ENST00000425280 KIAA1024LP59773 190 aa25.59■■□□□ 1.69
LDB1-202ENST00000425280 CYP2A13Q16696 494 aa25.59■■□□□ 1.69
LDB1-202ENST00000425280 NANOGP8Q6NSW7 305 aa25.59■■□□□ 1.69
LDB1-202ENST00000425280 SPATA24Q86W54 205 aa25.59■■□□□ 1.69
LDB1-202ENST00000425280 FAM9CQ8IZT9 166 aa25.59■■□□□ 1.69
LDB1-202ENST00000425280 FLCNQ8NFG4 579 aa25.59■■□□□ 1.69
LDB1-202ENST00000425280 REPS1Q96D71 796 aa25.59■■□□□ 1.69
LDB1-202ENST00000425280 C12orf66Q96MD2 445 aa25.59■■□□□ 1.69
LDB1-202ENST00000425280 NANOGQ9H9S0 305 aa25.59■■□□□ 1.69
LDB1-202ENST00000425280 COLQQ9Y215 455 aaPredicted RBP25.59■■□□□ 1.69
LDB1-202ENST00000425280 KCNJ13O60928 360 aa25.58■■□□□ 1.69
LDB1-202ENST00000425280 PGRP06401 933 aa25.58■■□□□ 1.69
LDB1-202ENST00000425280 TDGQ13569 410 aa25.58■■□□□ 1.69
LDB1-202ENST00000425280 PWP1Q13610 501 aa25.58■■□□□ 1.69
LDB1-202ENST00000425280 SMAD2Q15796 467 aaKnown RBP25.58■■□□□ 1.69
LDB1-202ENST00000425280 SPATS1Q496A3 300 aa25.58■■□□□ 1.69
LDB1-202ENST00000425280 ZFP1Q6P2D0 407 aa25.58■■□□□ 1.69
LDB1-202ENST00000425280 Q6ZS52 159 aa25.58■■□□□ 1.69
LDB1-202ENST00000425280 EBF1Q9UH73 591 aa25.58■■□□□ 1.69
LDB1-202ENST00000425280 HSD17B2P37059 387 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 MLF2Q15773 248 aaPredicted RBP25.57■■□□□ 1.68
LDB1-202ENST00000425280 PAGE2BQ5JRK9 111 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 HID1Q8IV36 788 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 LAS2Q8IYD9 372 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 TMEM74Q96NL1 305 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 FERD3LQ96RJ6 166 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 HAUS8Q9BT25 410 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 EBPLQ9BY08 206 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 SPNS1Q9H2V7 528 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 LRRC42Q9Y546 428 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 PCM1Q15154 2024 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 PRSS38A1L453 326 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 PIPSLA2A3N6 862 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 LRRC72A6NJI9 287 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 H0Y8X5 98 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 FPGTO14772 594 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 NVLO15381 856 aaKnown RBP25.57■■□□□ 1.68
LDB1-202ENST00000425280 PCSK2P16519 638 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 CLNS1AP54105 237 aaKnown RBP25.57■■□□□ 1.68
LDB1-202ENST00000425280 PRR23BQ6ZRT6 265 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 GTF2H4Q92759 462 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 C11orf24Q96F05 449 aaPredicted RBP25.57■■□□□ 1.68
LDB1-202ENST00000425280 EGLN2Q96KS0 407 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 SPATA7Q9P0W8 599 aa25.57■■□□□ 1.68
LDB1-202ENST00000425280 SCAMP1O15126 338 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 CDH1P12830 882 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 RPS13P62277 151 aaKnown RBP25.56■■□□□ 1.68
LDB1-202ENST00000425280 PLIN5Q00G26 463 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 MEF2AQ02078 507 aaPredicted RBP25.56■■□□□ 1.68
LDB1-202ENST00000425280 RIMKLAQ8IXN7 391 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 METTL2AQ96IZ6 378 aaKnown RBP25.56■■□□□ 1.68
LDB1-202ENST00000425280 RSRC1Q96IZ7 334 aaKnown RBP25.56■■□□□ 1.68
LDB1-202ENST00000425280 BMFQ96LC9 184 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 PPM1MQ96MI6 270 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 PPT2Q9UMR5 302 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 RUVBL1Q9Y265 456 aaKnown RBP25.56■■□□□ 1.68
LDB1-202ENST00000425280 NEUROG3Q9Y4Z2 214 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 C15orf38-AP3S2A0A0A6YYH1 394 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 SH3BGRLO75368 114 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 C8BP07358 591 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 IDSP22304 550 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 HNRNPA2B1P22626 353 aaKnown RBP25.56■■□□□ 1.68
LDB1-202ENST00000425280 ACSM2AQ08AH3 577 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 LAPTM5Q13571 262 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 CLCA4Q14CN2 919 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 MAPKAPK3Q16644 382 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 HIST2H2ACQ16777 129 aaPredicted RBP25.56■■□□□ 1.68
LDB1-202ENST00000425280 ACSM2BQ68CK6 577 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 HIST2H2AA3Q6FI13 130 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 ARPINQ7Z6K5 226 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 DHFR2Q86XF0 187 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 OR52E6Q96RD3 313 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 CGREF1Q99674 301 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 ACAT2Q9BWD1 397 aa25.56■■□□□ 1.68
LDB1-202ENST00000425280 CARS2Q9HA77 564 aaKnown RBP25.56■■□□□ 1.68
LDB1-202ENST00000425280 USP36Q9P275 1121 aaKnown RBP25.56■■□□□ 1.68
LDB1-202ENST00000425280 PRUNE2Q8WUY3 3088 aa25.55■■□□□ 1.68
LDB1-202ENST00000425280 KCNH1O95259 989 aa25.55■■□□□ 1.68
LDB1-202ENST00000425280 GSK3BP49841 420 aa25.55■■□□□ 1.68
LDB1-202ENST00000425280 EEFSECP57772 596 aaKnown RBP25.55■■□□□ 1.68
LDB1-202ENST00000425280 PHC1P78364 1004 aa25.55■■□□□ 1.68
LDB1-202ENST00000425280 LIPEQ05469 1076 aa25.55■■□□□ 1.68
LDB1-202ENST00000425280 NFATC4Q14934 902 aa25.55■■□□□ 1.68
LDB1-202ENST00000425280 SF1Q15637 639 aaKnown RBP25.55■■□□□ 1.68
LDB1-202ENST00000425280 TPRG1LQ5T0D9 272 aa25.55■■□□□ 1.68
LDB1-202ENST00000425280 C10orf62Q5T681 223 aaPredicted RBP25.55■■□□□ 1.68
LDB1-202ENST00000425280 CYP2R1Q6VVX0 501 aa25.55■■□□□ 1.68
LDB1-202ENST00000425280 OR1E3Q8WZA6 343 aa25.55■■□□□ 1.68
LDB1-202ENST00000425280 TESCQ96BS2 214 aa25.55■■□□□ 1.68
LDB1-202ENST00000425280 ANKRD27Q96NW4 1050 aa25.55■■□□□ 1.68
LDB1-202ENST00000425280 IMP3Q9NV31 184 aaKnown RBP25.55■■□□□ 1.68
LDB1-202ENST00000425280 ZNF839A8K0R7 811 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 LRATO95237 230 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 BNIP2Q12982 314 aa25.54■■□□□ 1.68
LDB1-202ENST00000425280 ENPP7Q6UWV6 458 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms