RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 FAM129BQ96TA1 746 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 SLC39A3Q9BRY0 314 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 USP29Q9HBJ7 922 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 MTMR10Q9NXD2 777 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 VPS29Q9UBQ0 182 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 Q9Y3F1 56 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 ABHD18Q0P651 414 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 TCEAL1Q15170 157 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 ZNF423Q2M1K9 1284 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 SPIN4Q56A73 249 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 PAQR3Q6TCH7 311 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 C1orf216Q8TAB5 229 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 CD99L2Q8TCZ2 262 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 FBXL20Q96IG2 436 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 ARL5AQ9Y689 179 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 A0A075B6Q4 140 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 DUXAA6NLW8 204 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 H1F0P07305 194 aaKnown RBP13.48□□□□□ -0.25
SREBF2-202ENST00000424354 PABPC4LP0CB38 370 aaKnown RBP13.48□□□□□ -0.25
SREBF2-202ENST00000424354 PDHA2P29803 388 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 GRIA1P42261 906 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 SEMA3AQ14563 771 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 ZNF181Q2M3W8 571 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 SH3PXD2AQ5TCZ1 1133 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 LINGO4Q6UY18 593 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 OR2L3Q8NG85 312 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 AIFM2Q9BRQ8 373 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 GTPBP2Q9BX10 602 aaKnown RBP13.48□□□□□ -0.25
SREBF2-202ENST00000424354 UCK2Q9BZX2 261 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 LIN28AQ9H9Z2 209 aaKnown RBP13.48□□□□□ -0.25
SREBF2-202ENST00000424354 SNX10Q9Y5X0 201 aa13.48□□□□□ -0.25
SREBF2-202ENST00000424354 C5orf51A6NDU8 294 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 H0YJX3 145 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 CLDN4O14493 209 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 TYROBPO43914 113 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 ARL6IP5O75915 188 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 PIGRP01833 764 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 CPN2P22792 545 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 DDX6P26196 483 aaKnown RBP eCLIP13.47□□□□□ -0.252e-10■■■□□ 17.8
SREBF2-202ENST00000424354 DNASE1L3Q13609 305 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 LBX2Q6XYB7 198 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 ZNF782Q6ZMW2 699 aaPredicted RBP13.47□□□□□ -0.25
SREBF2-202ENST00000424354 CCDC28AQ8IWP9 274 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 TSPEARQ8WU66 669 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 SLC35A5Q9BS91 424 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 GDAP2Q9NXN4 497 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 SIRPGQ9P1W8 387 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 ZNF69Q9UC07 566 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 SYN3O14994 580 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 CXCL14O95715 111 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 PLPP4Q5VZY2 271 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 MSANTD2Q6P1R3 559 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 SMG7Q92540 1137 aaKnown RBP13.47□□□□□ -0.25
SREBF2-202ENST00000424354 SCGB3A2Q96PL1 93 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 PHOX2BQ99453 314 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 MIPEPQ99797 713 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 CCDC106Q9BWC9 280 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 P2RX2Q9UBL9 471 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 TNFRSF10DQ9UBN6 386 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 GTF2IRD1Q9UHL9 959 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 CREG1O75629 220 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 DNAJB13P59910 316 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 MEP1AQ16819 746 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 KIAA1161Q6NSJ0 714 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 FBXO46Q6PJ61 603 aaPredicted RBP13.47□□□□□ -0.25
SREBF2-202ENST00000424354 SLC2A7Q6PXP3 512 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 MBOAT1Q6ZNC8 495 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 C2orf73Q8N5S3 287 aaPredicted RBP13.47□□□□□ -0.25
SREBF2-202ENST00000424354 TRIM36Q9NQ86 728 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 FBXW2Q9UKT8 454 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 MED31Q9Y3C7 131 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 KLHL33A6NCF5 533 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 L7N2F9 121 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 CDRT1O95170 752 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 MATN4O95460 622 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 ZNF3P17036 446 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 EMC10Q5UCC4 262 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 TNFAIP8L2Q6P589 184 aaPredicted RBP13.47□□□□□ -0.25
SREBF2-202ENST00000424354 ATAD1Q8NBU5 361 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 KXD1Q9BQD3 176 aa13.47□□□□□ -0.25
SREBF2-202ENST00000424354 TMEM233B4DJY2 109 aa13.46□□□□□ -0.25
SREBF2-202ENST00000424354 EFNA1P20827 205 aaPredicted RBP13.46□□□□□ -0.25
SREBF2-202ENST00000424354 VEGFBP49765 207 aa13.46□□□□□ -0.25
SREBF2-202ENST00000424354 ADGRD2Q7Z7M1 963 aa13.46□□□□□ -0.25
SREBF2-202ENST00000424354 TMEM17Q86X19 198 aa13.46□□□□□ -0.25
SREBF2-202ENST00000424354 RBM12BQ8IXT5 1001 aaKnown RBP13.46□□□□□ -0.25
SREBF2-202ENST00000424354 C7orf61Q8IZ16 206 aa13.46□□□□□ -0.25
SREBF2-202ENST00000424354 PRICKLE1Q96MT3 831 aaPredicted RBP13.46□□□□□ -0.25
SREBF2-202ENST00000424354 IL4I1Q96RQ9 567 aa13.46□□□□□ -0.25
SREBF2-202ENST00000424354 OSBPL2Q9H1P3 480 aa13.46□□□□□ -0.25
SREBF2-202ENST00000424354 ADAMTS10Q9H324 1103 aa13.46□□□□□ -0.25
SREBF2-202ENST00000424354 TRPV4Q9HBA0 871 aa13.46□□□□□ -0.25
SREBF2-202ENST00000424354 RDH8Q9NYR8 311 aa13.46□□□□□ -0.25
SREBF2-202ENST00000424354 PHF24Q9UPV7 400 aa13.46□□□□□ -0.25
SREBF2-202ENST00000424354 STBD1O95210 358 aa13.46□□□□□ -0.25
SREBF2-202ENST00000424354 SIX3O95343 332 aaPredicted RBP13.46□□□□□ -0.25
SREBF2-202ENST00000424354 OR4Q2P0C623 313 aa13.46□□□□□ -0.25
SREBF2-202ENST00000424354 ZNF823P16415 610 aa13.46□□□□□ -0.25
SREBF2-202ENST00000424354 HSD17B2P37059 387 aa13.46□□□□□ -0.25
SREBF2-202ENST00000424354 ATXN1P54253 815 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms