RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 IGHV5-10-1A0A0J9YXX1 117 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 PPP6CO00743 305 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 OR7A17O14581 309 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 BIRC5O15392 142 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 CCNDBP1O95273 360 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 KCNK5O95279 499 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 THRAP10827 490 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 GNAZP19086 355 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 BGNP21810 368 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 MEF2AQ02078 507 aaPredicted RBP15.11■□□□□ 0.01
DDX55-203ENST00000421670 CLCQ05315 142 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 CHI3L2Q15782 390 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 RBBP7Q16576 425 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 CFAP157Q5JU67 520 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 CACHD1Q5VU97 1274 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 CES4AQ5XG92 561 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 FAM219BQ5XKK7 198 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 METTL2BQ6P1Q9 378 aaKnown RBP15.11■□□□□ 0.01
DDX55-203ENST00000421670 FRMD7Q6ZUT3 714 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 ADCK2Q7Z695 626 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 SLITRK4Q8IW52 837 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 OR52B6Q8NGF0 335 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 WDR48Q8TAF3 677 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 TRPC4APQ8TEL6 797 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 SREK1Q8WXA9 508 aaKnown RBP15.11■□□□□ 0.01
DDX55-203ENST00000421670 CCDC74BQ96LY2 380 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 CD180Q99467 661 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 DPH7Q9BTV6 452 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 NOL11Q9H8H0 719 aaKnown RBP15.11■□□□□ 0.01
DDX55-203ENST00000421670 IPPKQ9H8X2 491 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 C1GALT1Q9NS00 363 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 A0A1B0GTL3 188 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 DCDC2BA2VCK2 349 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 SLC9B1P1A6NJY1 282 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 H7BY64 318 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 PRAMEF4O60810 478 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 DKK1O94907 266 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 NEFHP12036 1026 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 ARL1P40616 181 aaPredicted RBP15.11■□□□□ 0.01
DDX55-203ENST00000421670 GRIA3P42263 894 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 PIK3CGP48736 1102 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 SEPHS1P49903 392 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 ABATP80404 500 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 E2F1Q01094 437 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 PHF19Q5T6S3 580 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 PRAMEF9Q5VWM5 478 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 RBM44Q6ZP01 1051 aaKnown RBP15.11■□□□□ 0.01
DDX55-203ENST00000421670 PPP1R14CQ8TAE6 165 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 PRAP1Q96NZ9 151 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 TRAPPC9Q96Q05 1148 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 CDK15Q96Q40 435 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 INTS9Q9NV88 658 aaKnown RBP15.11■□□□□ 0.01
DDX55-203ENST00000421670 GPRC5BQ9NZH0 403 aa15.11■□□□□ 0.01
DDX55-203ENST00000421670 APOBEC2Q9Y235 224 aaKnown RBP15.11■□□□□ 0.01
DDX55-203ENST00000421670 CLGNO14967 610 aa15.1■□□□□ 0.01
DDX55-203ENST00000421670 KATNA1O75449 491 aa15.1■□□□□ 0.01
DDX55-203ENST00000421670 VARSP26640 1264 aaKnown RBP15.1■□□□□ 0.01
DDX55-203ENST00000421670 ARRB2P32121 409 aa15.1■□□□□ 0.01
DDX55-203ENST00000421670 CCNG1P51959 295 aa15.1■□□□□ 0.01
DDX55-203ENST00000421670 ASPHQ12797 758 aa15.1■□□□□ 0.01
DDX55-203ENST00000421670 ZIC1Q15915 447 aa15.1■□□□□ 0.01
DDX55-203ENST00000421670 CLPPQ16740 277 aaPredicted RBP15.1■□□□□ 0.01
DDX55-203ENST00000421670 XKR6Q5GH73 641 aa15.1■□□□□ 0.01
DDX55-203ENST00000421670 HES3Q5TGS1 186 aa15.1■□□□□ 0.01
DDX55-203ENST00000421670 FCRL6Q6DN72 434 aa15.1■□□□□ 0.01
DDX55-203ENST00000421670 SLCO4C1Q6ZQN7 724 aa15.1■□□□□ 0.01
DDX55-203ENST00000421670 PRSS42Q7Z5A4 293 aa15.1■□□□□ 0.01
DDX55-203ENST00000421670 C19orf47Q8N9M1 422 aaKnown RBP15.1■□□□□ 0.01
DDX55-203ENST00000421670 DYDC1Q8WWB3 177 aa15.1■□□□□ 0.01
DDX55-203ENST00000421670 PRR11Q96HE9 360 aaPredicted RBP15.1■□□□□ 0.01
DDX55-203ENST00000421670 DPYSL5Q9BPU6 564 aa15.1■□□□□ 0.01
DDX55-203ENST00000421670 RTKNQ9BST9 563 aa15.1■□□□□ 0.01
DDX55-203ENST00000421670 SHCBP1LQ9BZQ2 653 aa15.1■□□□□ 0.01
DDX55-203ENST00000421670 SPNS1Q9H2V7 528 aa15.1■□□□□ 0.01
DDX55-203ENST00000421670 SOHLH2Q9NX45 425 aa15.1■□□□□ 0.01
DDX55-203ENST00000421670 SPTBN2O15020 2390 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 UBFD1O14562 309 aaKnown RBP15.09■□□□□ 0.01
DDX55-203ENST00000421670 HAT1O14929 419 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 CHRNGP07510 517 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 CD22P20273 847 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 IRF8Q02556 426 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 LCP2Q13094 533 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 TRAF3Q13114 568 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 CHIT1Q13231 466 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 ZNF425Q6IV72 752 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 FIGLAQ6QHK4 219 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 NXPE4Q6UWF7 544 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 ATG14Q6ZNE5 492 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 MYLK4Q86YV6 388 aaPredicted RBP15.09■□□□□ 0.01
DDX55-203ENST00000421670 PLD3Q8IV08 490 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 ZNF740Q8NDX6 193 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 OR6Y1Q8NGX8 325 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 FAM76AQ8TAV0 307 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 ATP6V1E2Q96A05 226 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 ACTR8Q9H981 624 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 PDP2Q9P2J9 529 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 SPTBP11277 2137 aa15.09■□□□□ 0.01
DDX55-203ENST00000421670 FEZF1A0PJY2 475 aa15.08■□□□□ 0
DDX55-203ENST00000421670 OR2A25A4D2G3 310 aa15.08■□□□□ 0
DDX55-203ENST00000421670 LYPLA1O75608 230 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms