RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 P3H1Q32P28 736 aa7.7□□□□□ -1.18
VIM-202ENST00000421459 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.7□□□□□ -1.18
VIM-202ENST00000421459 YOD1Q5VVQ6 348 aaPredicted RBP7.7□□□□□ -1.18
VIM-202ENST00000421459 HIBCHQ6NVY1 386 aaPredicted RBP7.7□□□□□ -1.18
VIM-202ENST00000421459 LRRC8BQ6P9F7 803 aa7.7□□□□□ -1.18
VIM-202ENST00000421459 RNF44Q7L0R7 432 aa7.7□□□□□ -1.18
VIM-202ENST00000421459 MRGPRGQ86SM5 289 aa7.7□□□□□ -1.18
VIM-202ENST00000421459 PPFIBP2Q8ND30 876 aa7.7□□□□□ -1.18
VIM-202ENST00000421459 HAS2Q92819 552 aa7.7□□□□□ -1.18
VIM-202ENST00000421459 RAD51AP1Q96B01 352 aa7.7□□□□□ -1.18
VIM-202ENST00000421459 MMABQ96EY8 250 aaPredicted RBP7.7□□□□□ -1.18
VIM-202ENST00000421459 TTC1Q99614 292 aa7.7□□□□□ -1.18
VIM-202ENST00000421459 ZFYVE21Q9BQ24 234 aa7.7□□□□□ -1.18
VIM-202ENST00000421459 MACROD1Q9BQ69 325 aa7.7□□□□□ -1.18
VIM-202ENST00000421459 HES7Q9BYE0 225 aa7.7□□□□□ -1.18
VIM-202ENST00000421459 ENAMQ9NRM1 1142 aa7.7□□□□□ -1.18
VIM-202ENST00000421459 RAB6BQ9NRW1 208 aa7.7□□□□□ -1.18
VIM-202ENST00000421459 IL1RAPL1Q9NZN1 696 aa7.7□□□□□ -1.18
VIM-202ENST00000421459 MRPS2Q9Y399 296 aaKnown RBP7.7□□□□□ -1.18
VIM-202ENST00000421459 IGLV3-12A0A075B6K2 115 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 TRAV17A0A0B4J275 112 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 A8MUI8 341 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 BTNL10A8MVZ5 291 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 E7EVH7 732 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 MAN1A2O60476 641 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 NDUFS3O75489 264 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 USP1O94782 785 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 SEC24DO94855 1032 aaPredicted RBP7.69□□□□□ -1.18
VIM-202ENST00000421459 BMP10O95393 424 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 GAS8O95995 478 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 SERPINA7P05543 415 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 APRTP07741 180 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 UQCRHP07919 91 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 ERVK-10P10266 1014 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 ARNTP27540 789 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 RPL22P35268 128 aaKnown RBP7.69□□□□□ -1.18
VIM-202ENST00000421459 SLC26A3P40879 764 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 EIF3BP55884 814 aaKnown RBP7.69□□□□□ -1.18
VIM-202ENST00000421459 KRTAP10-9P60411 292 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 ADORA2A-AS1P86434 159 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 ART3Q13508 389 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 TMED2Q15363 201 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 C3AR1Q16581 482 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 MUM1Q2TAK8 710 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 ACSBG2Q5FVE4 666 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 PRMT9Q6P2P2 845 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 TTC23LQ6PF05 361 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 TMEM207Q6UWW9 146 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 LANCL3Q6ZV70 420 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 NEK10Q6ZWH5 1172 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 OTOAQ7RTW8 1153 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 PRSS41Q7RTY9 318 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 PAQR7Q86WK9 346 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 ZC3H7AQ8IWR0 971 aaKnown RBP7.69□□□□□ -1.18
VIM-202ENST00000421459 ZNF295-AS1Q8N0V1 137 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 ARHGEF39Q8N4T4 335 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 CSNK1A1LQ8N752 337 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 UBL4BQ8N7F7 174 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 COG1Q8WTW3 980 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 LURAP1Q96LR2 239 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 CCDC138Q96M89 665 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 BIRC8Q96P09 236 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 PKP4Q99569 1192 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 SLC30A3Q99726 388 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 PLCD4Q9BRC7 762 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 DESI2Q9BSY9 194 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 TSSK1BQ9BXA7 367 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 ZNF700Q9H0M5 742 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 TSPAN10Q9H1Z9 355 aaPredicted RBP7.69□□□□□ -1.18
VIM-202ENST00000421459 MRPS30Q9NP92 439 aaKnown RBP7.69□□□□□ -1.18
VIM-202ENST00000421459 ANKRD10Q9NXR5 420 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 STMN3Q9NZ72 180 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 SEC14L3Q9UDX4 400 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 ANAPC5Q9UJX4 755 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 MKL2Q9ULH7 1088 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 RIMKLBQ9ULI2 386 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 KLK4Q9Y5K2 254 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 FAM169AQ9Y6X4 670 aa7.69□□□□□ -1.18
VIM-202ENST00000421459 MDC1Q14676 2089 aaKnown RBP7.68□□□□□ -1.18
VIM-202ENST00000421459 TCRBV7S3A2A0A539 114 aa7.68□□□□□ -1.18
VIM-202ENST00000421459 ARHGEF33A8MVX0 844 aa7.68□□□□□ -1.18
VIM-202ENST00000421459 FAM227AF5H4B4 570 aa7.68□□□□□ -1.18
VIM-202ENST00000421459 HAT1O14929 419 aa7.68□□□□□ -1.18
VIM-202ENST00000421459 PRAMEF2O60811 474 aa7.68□□□□□ -1.18
VIM-202ENST00000421459 VAPBO95292 243 aa7.68□□□□□ -1.18
VIM-202ENST00000421459 RASAL1O95294 804 aa7.68□□□□□ -1.18
VIM-202ENST00000421459 MATN4O95460 622 aa7.68□□□□□ -1.18
VIM-202ENST00000421459 CXCR2P25025 360 aa7.68□□□□□ -1.18
VIM-202ENST00000421459 MGAT1P26572 445 aa7.68□□□□□ -1.18
VIM-202ENST00000421459 CMPK1P30085 196 aa7.68□□□□□ -1.18
VIM-202ENST00000421459 RPA3P35244 121 aaPredicted RBP7.68□□□□□ -1.18
VIM-202ENST00000421459 FDFT1P37268 417 aa7.68□□□□□ -1.18
VIM-202ENST00000421459 CA7P43166 264 aa7.68□□□□□ -1.18
VIM-202ENST00000421459 ZNF75DP51815 510 aa7.68□□□□□ -1.18
VIM-202ENST00000421459 ZNF33BQ06732 778 aa7.68□□□□□ -1.18
VIM-202ENST00000421459 DSG2Q14126 1118 aa7.68□□□□□ -1.18
VIM-202ENST00000421459 KCNJ11Q14654 390 aa7.68□□□□□ -1.18
VIM-202ENST00000421459 ZNF630Q2M218 657 aaPredicted RBP7.68□□□□□ -1.18
VIM-202ENST00000421459 ZXDCQ2QGD7 858 aaPredicted RBP7.68□□□□□ -1.18
VIM-202ENST00000421459 PCID2Q5JVF3 399 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms