RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 TGP01266 2768 aa8.48□□□□□ -1.05
TRIM39-206ENST00000420746 ARID1AO14497 2285 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 A0A1W2PPR1 153 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 CFAP99D6REC4 459 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 AP2A1O95782 977 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 S1PR4O95977 384 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 TPBGLP0DKB5 382 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 RARAP10276 462 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 ATP1B2P14415 290 aaPredicted RBP8.47□□□□□ -1.05
TRIM39-206ENST00000420746 PDHA2P29803 388 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 TRHRP34981 398 aaPredicted RBP8.47□□□□□ -1.05
TRIM39-206ENST00000420746 THBS2P35442 1172 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 CHRNA4P43681 627 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 VSX2P58304 361 aaPredicted RBP8.47□□□□□ -1.05
TRIM39-206ENST00000420746 PCSK7Q16549 785 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 CHRFAM7AQ494W8 412 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 FIGLAQ6QHK4 219 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 ZNF227Q86WZ6 799 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 AMER3Q8N944 861 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 FAM71BQ8TC56 605 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 HSPH1Q92598 858 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 YIPF4Q9BSR8 244 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 GSX2Q9BZM3 304 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 ATG10Q9H0Y0 220 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 SLC25A51Q9H1U9 297 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 GANQ9H2C0 597 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 MTRF1LQ9UGC7 380 aaKnown RBP8.47□□□□□ -1.05
TRIM39-206ENST00000420746 ASF1AQ9Y294 204 aa8.47□□□□□ -1.05
TRIM39-206ENST00000420746 MBD3L4A6NDZ8 208 aaPredicted RBP8.46□□□□□ -1.06
TRIM39-206ENST00000420746 MBD3L5A6NJ08 208 aaPredicted RBP8.46□□□□□ -1.06
TRIM39-206ENST00000420746 HSPB2A8KAH6 182 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 NPIPA2E9PIF3 369 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 NPIPA3F8WFD2 350 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 DVL2O14641 736 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 MAN1A2O60476 641 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 EPOP01588 193 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 FPR1P21462 350 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 ACADLP28330 430 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 PKLRP30613 574 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 AGTR2P50052 363 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 EFNA3P52797 238 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 ZBTB17Q13105 803 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 MESDQ14696 234 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 HSPB2Q16082 182 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 PRTGQ2VWP7 1150 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 ZNF468Q5VIY5 522 aaPredicted RBP8.46□□□□□ -1.06
TRIM39-206ENST00000420746 RGS9BPQ6ZS82 235 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 GLT6D1Q7Z4J2 308 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 ZC3H7AQ8IWR0 971 aaKnown RBP8.46□□□□□ -1.06
TRIM39-206ENST00000420746 SULF2Q8IWU5 870 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 AMER2Q8N7J2 671 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 RELL2Q8NC24 303 aaPredicted RBP8.46□□□□□ -1.06
TRIM39-206ENST00000420746 OR52N2Q8NGI0 321 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 PLCD4Q9BRC7 762 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 ZDHHC11Q9H8X9 412 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.46□□□□□ -1.06
TRIM39-206ENST00000420746 ZC3H7BQ9UGR2 993 aaKnown RBP8.46□□□□□ -1.06
TRIM39-206ENST00000420746 KLHL20Q9Y2M5 609 aa8.46□□□□□ -1.06
TRIM39-206ENST00000420746 A0A1B0GVC2 190 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 LOC285095A0A1B0GVY8 99 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 KCNK1O00180 336 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 LIN7AO14910 233 aaPredicted RBP8.45□□□□□ -1.06
TRIM39-206ENST00000420746 PEX1O43933 1283 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 CTSVO60911 334 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 SRP72O76094 671 aaKnown RBP8.45□□□□□ -1.06
TRIM39-206ENST00000420746 IGHG3P01860 377 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 ANXA5P08758 320 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 ERVK-10P10266 1014 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 GABRA1P14867 456 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 GRIA3P42263 894 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 HLCSP50747 726 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 PPIDQ08752 370 aaKnown RBP8.45□□□□□ -1.06
TRIM39-206ENST00000420746 C1orf185Q5T7R7 199 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 GARNL3Q5VVW2 1013 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 FRMPD2BQ6IN97 320 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 ZNF585AQ6P3V2 769 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 BHLHB9Q6PI77 547 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 RNF44Q7L0R7 432 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 RPS19BP1Q86WX3 136 aaKnown RBP8.45□□□□□ -1.06
TRIM39-206ENST00000420746 LINC01555Q8NAE3 123 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 NAT14Q8WUY8 206 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 ROBO4Q8WZ75 1007 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 SLCO2A1Q92959 643 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 ULK4Q96C45 1275 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 PERPQ96FX8 193 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 CABS1Q96KC9 395 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 DACH2Q96NX9 599 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 SMC6Q96SB8 1091 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 CYTH2Q99418 400 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 COPS8Q99627 209 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 AGPAT1Q99943 283 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 YIPF2Q9BWQ6 316 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 PLA2G12AQ9BZM1 189 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 TRIM7Q9C029 511 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 VN1R1Q9GZP7 353 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 ASB8Q9H765 288 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 ATP6V1DQ9Y5K8 247 aa8.45□□□□□ -1.06
TRIM39-206ENST00000420746 IGLV3-16A0A075B6K0 115 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 IGHV3-20A0A0C4DH32 117 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 ACOT7O00154 380 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms