RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 HMGA2P52926 109 aa3.57□□□□□ -1.84
CNGA1-203ENST00000420489 BNIP1Q12981 228 aa3.57□□□□□ -1.84
CNGA1-203ENST00000420489 FOXE3Q13461 319 aa3.57□□□□□ -1.84
CNGA1-203ENST00000420489 HHATQ5VTY9 493 aa3.57□□□□□ -1.84
CNGA1-203ENST00000420489 NCAPH2Q6IBW4 605 aa3.57□□□□□ -1.84
CNGA1-203ENST00000420489 NOA1Q8NC60 698 aaKnown RBP3.57□□□□□ -1.84
CNGA1-203ENST00000420489 OR52K2Q8NGK3 314 aa3.57□□□□□ -1.84
CNGA1-203ENST00000420489 RASSF8Q8NHQ8 419 aa3.57□□□□□ -1.84
CNGA1-203ENST00000420489 CENPIQ92674 756 aaPredicted RBP3.57□□□□□ -1.84
CNGA1-203ENST00000420489 IFT74Q96LB3 600 aa3.57□□□□□ -1.84
CNGA1-203ENST00000420489 ACO2Q99798 780 aaKnown RBP3.57□□□□□ -1.84
CNGA1-203ENST00000420489 FSD1LQ9BXM9 530 aa3.57□□□□□ -1.84
CNGA1-203ENST00000420489 WDR12Q9GZL7 423 aaKnown RBP3.57□□□□□ -1.84
CNGA1-203ENST00000420489 PLSCR4Q9NRQ2 329 aa3.57□□□□□ -1.84
CNGA1-203ENST00000420489 HPF1Q9NWY4 346 aa3.57□□□□□ -1.84
CNGA1-203ENST00000420489 MAN1B1Q9UKM7 699 aa3.57□□□□□ -1.84
CNGA1-203ENST00000420489 TRAF3IP3Q9Y228 551 aa3.57□□□□□ -1.84
CNGA1-203ENST00000420489 ALG6Q9Y672 507 aa3.57□□□□□ -1.84
CNGA1-203ENST00000420489 CRYBG3Q68DQ2 2970 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 FAM47DPA6NHR8 397 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 LILRA5A6NI73 299 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 GOLGA8KD6RF30 607 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 H7C0S8 307 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 NDUFAB1O14561 156 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 EIF3HO15372 352 aaKnown RBP eCLIP3.56□□□□□ -1.84
CNGA1-203ENST00000420489 LMX1BO60663 402 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 SLITRK3O94933 977 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 SYF2O95926 243 aaKnown RBP3.56□□□□□ -1.84
CNGA1-203ENST00000420489 ONECUT2O95948 504 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 IL18BPO95998 194 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 CLTAP09496 248 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 TRIM49P0CI25 452 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 TRIM49CP0CI26 452 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 COMTP21964 271 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 YWHAQP27348 245 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 GNGT1P63211 74 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 COG7P83436 770 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 CD83Q01151 205 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 ACY1Q03154 408 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 PIGHQ14442 188 aaPredicted RBP3.56□□□□□ -1.84
CNGA1-203ENST00000420489 PIP5KL1Q5T9C9 394 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 METTL11BQ5VVY1 283 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 TLDC1Q6P9B6 456 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 INTS8Q75QN2 995 aaKnown RBP3.56□□□□□ -1.84
CNGA1-203ENST00000420489 SCN4BQ8IWT1 228 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 MARVELD2Q8N4S9 558 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 AMER2Q8N7J2 671 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 THOC1Q96FV9 657 aaKnown RBP3.56□□□□□ -1.84
CNGA1-203ENST00000420489 PPP1R16AQ96I34 528 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 CLUHP3Q96NS8 147 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 GBP5Q96PP8 586 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 SLC17A9Q9BYT1 436 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 LHPPQ9H008 270 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 C12orf65Q9H3J6 166 aaKnown RBP3.56□□□□□ -1.84
CNGA1-203ENST00000420489 FBXO44Q9H4M3 255 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 HAUS4Q9H6D7 363 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 SAMSN1Q9NSI8 373 aaKnown RBP3.56□□□□□ -1.84
CNGA1-203ENST00000420489 GDAP2Q9NXN4 497 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 NDOR1Q9UHB4 597 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 SAR1BQ9Y6B6 198 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 CAPN7Q9Y6W3 813 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 MGAM2Q2M2H8 2515 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 A8MVJ9 347 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 ZNF561-AS1K7EIQ3 104 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 NDC80O14777 642 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 POLR2DO15514 142 aaKnown RBP3.56□□□□□ -1.84
CNGA1-203ENST00000420489 ZSCAN9O15535 394 aaPredicted RBP3.56□□□□□ -1.84
CNGA1-203ENST00000420489 NEBLO76041 1014 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 MOCS3O95396 460 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 APOA4P06727 396 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 FAM153BP0C7A2 387 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 CTSEP14091 401 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 TRIM21P19474 475 aaKnown RBP3.56□□□□□ -1.84
CNGA1-203ENST00000420489 TEAD1P28347 426 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 TAF6P49848 677 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 HILS1P60008 231 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 HHEXQ03014 270 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 UBXN1Q04323 297 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 RELQ04864 619 aaPredicted RBP3.56□□□□□ -1.84
CNGA1-203ENST00000420489 DEUP1Q05D60 604 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 FOXO1Q12778 655 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 RCN1Q15293 331 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 CCDC142Q17RM4 750 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 TMEM215Q68D42 235 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 FAM166AQ6J272 317 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 CNNM4Q6P4Q7 775 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 MRGPREQ86SM8 312 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 PLXDC1Q8IUK5 500 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 SIAH3Q8IW03 269 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 ZC3H7AQ8IWR0 971 aaKnown RBP3.56□□□□□ -1.84
CNGA1-203ENST00000420489 TRIML2Q8N7C3 387 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 ZNF418Q8TF45 676 aaPredicted RBP3.56□□□□□ -1.84
CNGA1-203ENST00000420489 EPSTI1Q96J88 318 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 SH3GL3Q99963 347 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 TRIM54Q9BYV2 358 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 ELOVL4Q9GZR5 314 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 XAB2Q9HCS7 855 aaKnown RBP3.56□□□□□ -1.84
CNGA1-203ENST00000420489 HOMER3Q9NSC5 361 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 NECAP2Q9NVZ3 263 aa3.56□□□□□ -1.84
CNGA1-203ENST00000420489 EPHA6Q9UF33 1036 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms