RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 KCNQ1P51787 676 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 DAOAP59103 153 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 ST3GAL4Q11206 333 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 TSTQ16762 297 aaKnown RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 LY6KQ17RY6 165 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 PTCHD3Q3KNS1 767 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 SETMARQ53H47 684 aaPredicted RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 DALRD3Q5D0E6 543 aaKnown RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 SPANXN4Q5MJ08 99 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 SAXO2Q658L1 398 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 GPR153Q6NV75 609 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 ZNF782Q6ZMW2 699 aaPredicted RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 CLEC20AQ6ZU45 233 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 EFHBQ8N7U6 833 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 NLGN4YQ8NFZ3 816 aaPredicted RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 GPR150Q8NGU9 434 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 ENKURQ8TC29 256 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 MAGEB10Q96LZ2 347 aaPredicted RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 CDK15Q96Q40 435 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 MGLLQ99685 303 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 TM9SF2Q99805 663 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 ASPNQ9BXN1 380 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 SLC39A8Q9C0K1 460 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 EIF2B4Q9UI10 523 aaKnown RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 GABRQQ9UN88 632 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 I3L521 148 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 GLP2RO95838 553 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 SEMG1P04279 462 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 FABP3P05413 133 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 NUDT6P53370 316 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 VLDLRP98155 873 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 SEMA3AQ14563 771 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 FBXO47Q5MNV8 452 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 OR4F3Q6IEY1 312 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 Q6ZPB1 254 aaPredicted RBP7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 PAQR9Q6ZVX9 377 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 GALNT11Q8NCW6 608 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 C9orf43Q8TAL5 461 aaPredicted RBP7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 BTN2A2Q8WVV5 523 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 TBATAQ96M53 351 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 DCLRE1CQ96SD1 692 aaKnown RBP7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 TAPBPLQ9BX59 468 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 SLC25A51Q9H1U9 297 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 THUMPD1Q9NXG2 353 aaKnown RBP7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 ASB1Q9Y576 335 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 ALG5Q9Y673 324 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 PLA2G10O15496 165 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 LDB2O43679 373 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 WDR47O94967 919 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 RORCP51449 518 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 TEKQ02763 1124 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 MRNIPQ6NTE8 343 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 PLET1Q6UQ28 207 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 HDDC2Q7Z4H3 204 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 C9orf62Q8N4C0 152 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 GDPD1Q8N9F7 314 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 OR8H1Q8NGG4 311 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 METTL6Q8TCB7 284 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 ESAMQ96AP7 390 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 OR5M11Q96RB7 305 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 SPATA9Q9BWV2 254 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 NXF3Q9H4D5 531 aaKnown RBP7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 REEP1Q9H902 201 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 ELF5Q9UKW6 265 aaPredicted RBP7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 CMAHPQ9Y471 501 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 KCTD3Q9Y597 815 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 IQCMA0A1B0GVH7 501 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 NPEPPSL1A6NEC2 478 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 GFRA2O00451 464 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 C22orf31O95567 290 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 ZNF250P15622 560 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 TNNI3P19429 210 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 ACVR1Q04771 509 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 RGS1Q08116 209 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 ABHD18Q0P651 414 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 VEPH1Q14D04 833 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 SSX1Q16384 188 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 FAM131AQ6UXB0 335 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 IMP4Q96G21 291 aaKnown RBP7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 HYLS1Q96M11 299 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 PSKH2Q96QS6 385 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 CDCA4Q9BXL8 241 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 RAD18Q9NS91 495 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 OSER1Q9NX31 292 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 CSADQ9Y600 493 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 WNT9AO14904 365 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 C9P02748 559 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 ITGA1P56199 1179 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 PER3P56645 1201 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 MAB21L1Q13394 359 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 MED22Q15528 200 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.79□□□□□ -1.161e-6■□□□□ 9.6
HMGXB4-202ENST00000418170 LRRC66Q68CR7 880 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 ARMCX2Q7L311 632 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 DNAJB8Q8NHS0 232 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 PPP3R2Q96LZ3 170 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 KCNC2Q96PR1 638 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 OR52E6Q96RD3 313 aa7.79□□□□□ -1.16
HMGXB4-202ENST00000418170 CLMPQ9H6B4 373 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms