RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 FRMPD2BQ6IN97 320 aa13.07□□□□□ -0.32
SSB-204ENST00000417292 DENND5AQ6IQ26 1287 aa13.07□□□□□ -0.32
SSB-204ENST00000417292 NEK10Q6ZWH5 1172 aa13.07□□□□□ -0.32
SSB-204ENST00000417292 TAS2R42Q7RTR8 314 aa13.07□□□□□ -0.32
SSB-204ENST00000417292 PRUNE1Q86TP1 453 aa13.07□□□□□ -0.32
SSB-204ENST00000417292 SLC13A5Q86YT5 568 aaPredicted RBP13.07□□□□□ -0.32
SSB-204ENST00000417292 SLC35B2Q8TB61 432 aa13.07□□□□□ -0.32
SSB-204ENST00000417292 AGAP11Q8TF27 550 aa13.07□□□□□ -0.32
SSB-204ENST00000417292 NRGNQ92686 78 aa13.07□□□□□ -0.32
SSB-204ENST00000417292 DNAJC1Q96KC8 554 aaKnown RBP13.07□□□□□ -0.32
SSB-204ENST00000417292 IL17FQ96PD4 163 aa13.07□□□□□ -0.32
SSB-204ENST00000417292 ALS2CR12Q96Q35 445 aa13.07□□□□□ -0.32
SSB-204ENST00000417292 C19orf43Q9BQ61 176 aa13.07□□□□□ -0.32
SSB-204ENST00000417292 FERMT1Q9BQL6 677 aa13.07□□□□□ -0.32
SSB-204ENST00000417292 KCNF1Q9H3M0 494 aa13.07□□□□□ -0.32
SSB-204ENST00000417292 RIC8BQ9NVN3 520 aa13.07□□□□□ -0.32
SSB-204ENST00000417292 STMN3Q9NZ72 180 aa13.07□□□□□ -0.32
SSB-204ENST00000417292 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.07□□□□□ -0.32
SSB-204ENST00000417292 LOC105369274A0A096LPK9 316 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 LOC102723532A0A0G2JNH3 316 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 FAM221AA4D161 298 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 ADAM10O14672 748 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 SRPX2O60687 465 aaPredicted RBP13.06□□□□□ -0.32
SSB-204ENST00000417292 ANXA9O76027 345 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 AP2A2O94973 939 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 METTL18O95568 372 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 IGFBP2P18065 325 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 CXCR2P25025 360 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 DNAJA1P31689 397 aaKnown RBP13.06□□□□□ -0.32
SSB-204ENST00000417292 CXCR5P32302 372 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 EFNA3P52797 238 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 ZNF33BQ06732 778 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 PCOLCEQ15113 449 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 SF1Q15637 639 aaKnown RBP13.06□□□□□ -0.32
SSB-204ENST00000417292 LONRF1Q17RB8 773 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 KRTCAP3Q53RY4 240 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 PRMT9Q6P2P2 845 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 C3P1Q6ZMU1 363 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 ZNF662Q6ZS27 426 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 CHERPQ8IWX8 916 aaKnown RBP13.06□□□□□ -0.32
SSB-204ENST00000417292 OR4N4Q8N0Y3 316 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 C10orf90Q96M02 699 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 DMRTA2Q96SC8 542 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 HES7Q9BYE0 225 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 INTS7Q9NVH2 962 aaKnown RBP13.06□□□□□ -0.32
SSB-204ENST00000417292 SMARCAL1Q9NZC9 954 aa13.06□□□□□ -0.32
SSB-204ENST00000417292 ZC3H7BQ9UGR2 993 aaKnown RBP13.06□□□□□ -0.32
SSB-204ENST00000417292 LOC102723996A0A087X1L8 192 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 NPIPA5E9PKD4 350 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 H7C0S8 307 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 KDM1AO60341 852 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 S1PR4O95977 384 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 MYBL2P10244 700 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 ETS1P14921 441 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 FBLP22087 321 aaKnown RBP13.05□□□□□ -0.32
SSB-204ENST00000417292 IST1P53990 364 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 PRPSAP1Q14558 356 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 SYTL3Q4VX76 610 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 DOLPP1Q86YN1 238 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 TGIF2LYQ8IUE0 185 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 CA5BP1Q8WTZ4 195 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 PHF10Q8WUB8 498 aaKnown RBP13.05□□□□□ -0.32
SSB-204ENST00000417292 SLC22A18Q96BI1 424 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 SDCCAG3Q96C92 435 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 IMMP1LQ96LU5 166 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 TRIM51Q9BSJ1 452 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 ZNF700Q9H0M5 742 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 GSX1Q9H4S2 264 aaPredicted RBP13.05□□□□□ -0.32
SSB-204ENST00000417292 NPDC1Q9NQX5 325 aaPredicted RBP13.05□□□□□ -0.32
SSB-204ENST00000417292 TRMT1Q9NXH9 659 aaKnown RBP13.05□□□□□ -0.32
SSB-204ENST00000417292 NPIPA1Q9UND3 350 aa13.05□□□□□ -0.32
SSB-204ENST00000417292 GTF3C1Q12789 2109 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 FLNAP21333 2647 aaKnown RBP13.04□□□□□ -0.32
SSB-204ENST00000417292 A0A0J9YVX5 310 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 ASPDHA6ND91 283 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 TARM1B6A8C7 271 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 LIASO43766 372 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 CEP104O60308 925 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 FAM155BO75949 473 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 FTH1P02794 183 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 EIF2S1P05198 315 aaKnown RBP13.04□□□□□ -0.32
SSB-204ENST00000417292 ST13P50502 369 aaKnown RBP13.04□□□□□ -0.32
SSB-204ENST00000417292 CSE1LP55060 971 aaKnown RBP13.04□□□□□ -0.32
SSB-204ENST00000417292 HSF1Q00613 529 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 ALDH6A1Q02252 535 aaKnown RBP13.04□□□□□ -0.32
SSB-204ENST00000417292 VRK3Q8IV63 474 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 SIAH3Q8IW03 269 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 REXO1L1PQ8IX06 675 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 MDS2Q8NDY4 140 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 TRIM58Q8NG06 486 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 OR2L8Q8NGY9 312 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 ZUFSPQ96AP4 578 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 SIGLEC12Q96PQ1 595 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 CXXC4Q9H2H0 198 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 KLHL1Q9NR64 748 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 PIH1D1Q9NWS0 290 aaKnown RBP13.04□□□□□ -0.32
SSB-204ENST00000417292 TRPC4Q9UBN4 977 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 ZNF148Q9UQR1 794 aa13.04□□□□□ -0.32
SSB-204ENST00000417292 AAR2Q9Y312 384 aaKnown RBP13.04□□□□□ -0.32
SSB-204ENST00000417292 A8MUI8 341 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms