RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 FAM131AQ6UXB0 335 aa14.31□□□□□ -0.12
NCKIPSD-204ENST00000416649 GPR149Q86SP6 731 aa14.31□□□□□ -0.12
NCKIPSD-204ENST00000416649 GLCCI1Q86VQ1 547 aa14.31□□□□□ -0.12
NCKIPSD-204ENST00000416649 ENKURQ8TC29 256 aa14.31□□□□□ -0.12
NCKIPSD-204ENST00000416649 UTP15Q8TED0 518 aaKnown RBP14.31□□□□□ -0.12
NCKIPSD-204ENST00000416649 TNIP3Q96KP6 325 aa14.31□□□□□ -0.12
NCKIPSD-204ENST00000416649 GFM1Q96RP9 751 aaKnown RBP14.31□□□□□ -0.12
NCKIPSD-204ENST00000416649 PAAF1Q9BRP4 392 aa14.31□□□□□ -0.12
NCKIPSD-204ENST00000416649 NUSAP1Q9BXS6 441 aaKnown RBP14.31□□□□□ -0.12
NCKIPSD-204ENST00000416649 MRPL9Q9BYD2 267 aaKnown RBP14.31□□□□□ -0.12
NCKIPSD-204ENST00000416649 DPY30Q9C005 99 aa14.31□□□□□ -0.12
NCKIPSD-204ENST00000416649 SLC22A4Q9H015 551 aa14.31□□□□□ -0.12
NCKIPSD-204ENST00000416649 SIRT5Q9NXA8 310 aa14.31□□□□□ -0.12
NCKIPSD-204ENST00000416649 PCTPQ9UKL6 214 aa14.31□□□□□ -0.12
NCKIPSD-204ENST00000416649 CASTOR2A6NHX0 329 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 ARNTLO00327 626 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 MATN3O15232 486 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 CD3EAPO15446 510 aaKnown RBP14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 SLC7A4O43246 635 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 AP2S1P53680 142 aaPredicted RBP14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 ERVPABLB-1P60509 514 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 NKX3-2P78367 333 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 SCN1BQ07699 218 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 SEMA3AQ14563 771 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 TBCEQ15813 527 aaPredicted RBP14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 FAM171A1Q5VUB5 890 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 C9orf57Q5W0N0 161 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 LETMD1Q6P1Q0 360 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 CLEC20AQ6ZU45 233 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 GGHQ92820 318 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 MSANTD3Q96H12 275 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 B3GALT6Q96L58 329 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 OR52E6Q96RD3 313 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 ABCG8Q9H221 673 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 TFB2MQ9H5Q4 396 aaKnown RBP14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 C12orf10Q9HB07 376 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 RNF186Q9NXI6 227 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 MPP6Q9NZW5 540 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 ST3GAL5Q9UNP4 418 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 RWDD3Q9Y3V2 267 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 ARL5AQ9Y689 179 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 A0A0B4J293 547 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 STX7O15400 261 aaKnown RBP14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 CACNG3O60359 315 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 B3GALT4O96024 378 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 GSTM1P09488 218 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 PRKAR2AP13861 404 aaKnown RBP14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 PRKACAP17612 351 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 ETV3P41162 512 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 TIAL1Q01085 375 aaKnown RBP eCLIP14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 ST3GAL4Q11206 333 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 C18orf21Q32NC0 220 aaPredicted RBP14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 DCAF4L1Q3SXM0 396 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 SMYD5Q6GMV2 418 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 SLC44A2Q8IWA5 706 aaPredicted RBP14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 MSRB3Q8IXL7 192 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 PAF1Q8N7H5 531 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 FLCNQ8NFG4 579 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 OR13C4Q8NGS5 318 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 SETD6Q8TBK2 473 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 ASB15Q8WXK1 588 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 DPF3Q92784 378 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 RNF31Q96EP0 1072 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 TSGA13Q96PP4 275 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 OR5M11Q96RB7 305 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 MCCC1Q96RQ3 725 aaPredicted RBP14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 C11orf54Q9H0W9 315 aaPredicted RBP14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 C1orf109Q9NX04 203 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 NOD1Q9Y239 953 aa14.3□□□□□ -0.12
NCKIPSD-204ENST00000416649 TRAV19A0A0A6YYK7 116 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 SMIM30A4D0T7 59 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 ARHGEF15O94989 841 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 WISP3O95389 354 aaPredicted RBP14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 ASGR1P07306 291 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 RPS17P08708 135 aaKnown RBP14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 GLULP15104 373 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 TAGLNQ01995 201 aaKnown RBP14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 DSC2Q02487 901 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 SCAPQ12770 1279 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 QPRTQ15274 297 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 UBXN11Q5T124 520 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 SNX20Q7Z614 316 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 ARHGAP12Q8IWW6 846 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 RHEBL1Q8TAI7 183 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 TTC9Q92623 222 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 KIAA1191Q96A73 305 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 TRMT61AQ96FX7 289 aaKnown RBP14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 C17orf62Q9BQA9 187 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 MFSD1Q9H3U5 465 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 FAM83DQ9H4H8 585 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 AGO3Q9H9G7 860 aaKnown RBP14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 GLTPQ9NZD2 209 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 SLC23A1Q9UHI7 598 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 UNC80Q8N2C7 3258 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 PRRC2BQ5JSZ5 2229 aaKnown RBP14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 B4DXG7 233 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 GJB3O75712 270 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 POMCP01189 267 aa14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 RPL34P49207 117 aaKnown RBP14.29□□□□□ -0.12
NCKIPSD-204ENST00000416649 HMGCS1Q01581 520 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms