RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 ZNF582Q96NG8 517 aaPredicted RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 SPATC1LQ9H0A9 340 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 NEUROG2Q9H2A3 272 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 TXNRD2Q9NNW7 524 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 MYNNQ9NPC7 610 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 CYSLTR2Q9NS75 346 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 SLC35D1Q9NTN3 355 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 PSD3Q9NYI0 1048 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 SNX6Q9UNH7 406 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 A3GALT2U3KPV4 340 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 PDCD11Q14690 1871 aaKnown RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 LINC00854A0A1B0GVQ3 168 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 TIMM23O14925 209 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 NOBOXO60393 691 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 SELENOFO60613 162 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 SCGB2A1O75556 95 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 SLC25A27O95847 323 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 ALPPP05187 535 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 CHRNGP07510 517 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 SERPINF2P08697 491 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 ALPPL2P10696 532 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 B4GALT1P15291 398 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 PCSK6P29122 969 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 PRDX6P30041 224 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 ATP5OP48047 213 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 SNRPEP62304 92 aaKnown RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 IRX3P78415 501 aaPredicted RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 TFAP4Q01664 338 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 CFHR3Q02985 330 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 FAM153CQ494X1 144 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 PLAC9Q5JTB6 97 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 Q5PR19 223 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 BEND3Q5T5X7 828 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 SFMBT2Q5VUG0 894 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 DCAF12L2Q5VW00 463 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 FAM91A1Q658Y4 838 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 TRIM65Q6PJ69 517 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 BRAT1Q6PJG6 821 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 SIGLEC15Q6ZMC9 328 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 C11orf57Q6ZUT1 292 aaPredicted RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 PALB2Q86YC2 1186 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 ARID3BQ8IVW6 561 aaPredicted RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 CFAP206Q8IYR0 622 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 GUF1Q8N442 669 aaKnown RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 ARL14Q8N4G2 192 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 STEAP2Q8NFT2 490 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 OR56B2PQ8NGI1 322 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 OR1J2Q8NGS2 313 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 OXNAD1Q96HP4 312 aaPredicted RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 VPS39Q96JC1 886 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 FAM111AQ96PZ2 611 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 LSG1Q9H089 658 aaKnown RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 ASIC5Q9NY37 505 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 CHRNA9Q9UGM1 479 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 TRMT6Q9UJA5 497 aaKnown RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 EMSYQ7Z589 1322 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 PLXND1Q9Y4D7 1925 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 CENPVL1A0A0U1RR11 272 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 hDV102S1A0JD36 115 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 FAM157AC9JC47 383 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 E5RGE8 158 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 H0YCG3 227 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 M0QZ24 198 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 IKBKBO14920 756 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 MAGEB3O15480 346 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 SERPING1P05155 500 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 IGKV5-2P06315 115 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 HMBSP08397 361 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 PRG2P13727 222 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 ZFP36P26651 326 aaKnown RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 HSD17B2P37059 387 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 PRCPP42785 496 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 MTIF2P46199 727 aaKnown RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 BLKP51451 505 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 MAPK12P53778 367 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 HADHBP55084 474 aaKnown RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 EGR4Q05215 589 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 ZNF91Q05481 1191 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 TMED1Q13445 227 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 GAMTQ14353 236 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 NEDD9Q14511 834 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 DUOXA1Q1HG43 343 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 VWC2Q2TAL6 325 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 MDH1BQ5I0G3 518 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 DCST1Q5T197 706 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 C1orf185Q5T7R7 199 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 RNASEH2BQ5TBB1 312 aaKnown RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 NSUN5P2Q63ZY6 315 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 NEK5Q6P3R8 708 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 DPPA4Q7L190 304 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 ADAMTSL2Q86TH1 951 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 CEP57Q86XR8 500 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 DSELQ8IZU8 1212 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 MINDY2Q8NBR6 621 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 OR5M8Q8NGP6 311 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 ARRDC2Q8TBH0 407 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 CCDC110Q8TBZ0 833 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 TAS1R2Q8TE23 839 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 SEMA4DQ92854 862 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 DACT3Q96B18 629 aaPredicted RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms