RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 CCL21O00585 134 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 GAPDHSO14556 408 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 MAP2K7O14733 419 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 PRMT5O14744 637 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 PCDH17O14917 1159 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 VEGFDO43915 354 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 AP2A2O94973 939 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 C1QAP02745 245 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 AHSGP02765 367 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 ESR1P03372 595 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 SHBGP04278 402 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 MYZAPP0CAP1 466 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 OTX2P32243 289 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 SLC19A1P41440 591 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 SLC1A2P43004 574 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 PPP2R2AP63151 447 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 GTF2H3Q13889 308 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 TLR1Q15399 786 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 CEP85LQ5SZL2 805 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 TMTC4Q5T4D3 741 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 GPRC6AQ5T6X5 926 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 PACS1Q6VY07 963 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 DENND6AQ8IWF6 608 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 PIANPQ8IYJ0 282 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 D2HGDHQ8N465 521 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 SLC38A9Q8NBW4 561 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 DDHD1Q8NEL9 900 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 DNAJB14Q8TBM8 379 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 TSSK1BQ9BXA7 367 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 OSGEPL1Q9H4B0 414 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 FAM96AQ9H5X1 160 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 TRIM39Q9HCM9 518 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 SMYD2Q9NRG4 433 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 MARCH4Q9P2E8 410 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 PCYT1BQ9Y5K3 369 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 NFS1Q9Y697 457 aa13.04□□□□□ -0.32
RAPGEF1-204ENST00000414781 ACANP16112 2415 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 TLCD2A6NGC4 264 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 HAUS5O94927 633 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 CAPN1P07384 714 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 SNRPAP09012 282 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 RPS3P23396 243 aaKnown RBP eCLIP13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 AKT1P31749 480 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 RORAP35398 523 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 SKIV2L2P42285 1042 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 SMSP52788 366 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 SLC12A2P55011 1212 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 ZNF844Q08AG5 666 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 SSPNQ14714 243 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 DBN1Q16643 649 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 KRT71Q3SY84 523 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 UBAP2Q5T6F2 1119 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 FAM69BQ5VUD6 431 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 LCN10Q6JVE6 187 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 SYTL1Q8IYJ3 562 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 ZNF501Q96CX3 271 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 MTFMTQ96DP5 389 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 CLIP3Q96DZ5 547 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 MRRFQ96E11 262 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 TSPAN17Q96FV3 270 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 VPS39Q96JC1 886 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 GBP5Q96PP8 586 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 RBBP8Q99708 897 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 C17orf62Q9BQA9 187 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 FANCEQ9HB96 536 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 ZBTB20Q9HC78 741 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 SLC40A1Q9NP59 571 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 ZNF624Q9P2J8 865 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 GNPTGQ9UJJ9 305 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 ZGRF1Q86YA3 2104 aa13.03□□□□□ -0.32
RAPGEF1-204ENST00000414781 IGLV3-16A0A075B6K0 115 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 UBA6A0AVT1 1052 aaPredicted RBP13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 PDZK1P1A8MUH7 402 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 FADS2P1A8MWK0 482 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 RGS16O15492 202 aaPredicted RBP13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 GSTM1P09488 218 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 OR56A5P0C7T3 313 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 ATP1B2P14415 290 aaPredicted RBP13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 PKMP14618 531 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 FOSL1P15407 271 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 CA7P43166 264 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 CDKN1CP49918 316 aaPredicted RBP13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 KCNK10P57789 538 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 MPP1Q00013 466 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 POU4F1Q01851 419 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 GSTM4Q03013 218 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 TMEM115Q12893 351 aaPredicted RBP13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 GPR18Q14330 331 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 SEMA3AQ14563 771 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 PTRHD1Q6GMV3 140 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 UGT3A1Q6NUS8 523 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 RPUSD3Q6P087 351 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 DUS1LQ6P1R4 473 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 MYO7BQ6PIF6 2116 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 IGFL2Q6UWQ7 119 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 CCDC91Q7Z6B0 441 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 LDB1Q86U70 411 aaPredicted RBP13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 ZC3HC1Q86WB0 502 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 CARFQ8N187 725 aa13.02□□□□□ -0.33
RAPGEF1-204ENST00000414781 OR2W6PQ8NHA6 318 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms