RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 CATSPER2Q96P56 530 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 KCNA7Q96RP8 456 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 SUSD2Q9UGT4 822 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 FIS1Q9Y3D6 152 aa15.02□□□□□ -0.01
SHMT2-202ENST00000414700 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.02□□□□□ -0.01
SHMT2-202ENST00000414700 ASXL3Q9C0F0 2248 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 HEATR5BQ9P2D3 2071 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 ATP6V1G1O75348 118 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 RPN2P04844 631 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 YBX1P67809 324 aaKnown RBP15.01□□□□□ -0.01
SHMT2-202ENST00000414700 GRIK2Q13002 908 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 LCP2Q13094 533 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 ELOCQ15369 112 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 DEFB133Q30KQ1 61 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 C1QTNF12Q5T7M4 302 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 CLEC6AQ6EIG7 209 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 TTC23LQ6PF05 361 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 CRLF3Q8IUI8 442 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 ULK2Q8IYT8 1036 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 TCAIMQ8N3R3 496 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 OR56A3Q8NH54 315 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 ZDHHC1Q8WTX9 485 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 CXorf40BQ96DE9 158 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 ELF4Q99607 663 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-202ENST00000414700 SLC32A1Q9H598 525 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 IPPKQ9H8X2 491 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 IL21RQ9HBE5 538 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 MID1IP1Q9NPA3 183 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 RHBDL2Q9NX52 303 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 SPASTQ9UBP0 616 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 RAP2CQ9Y3L5 183 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 RALGAPA1Q6GYQ0 2036 aa15.01□□□□□ -0.01
SHMT2-202ENST00000414700 PRAMEF4O60810 478 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 JUNP05412 331 aaKnown RBP15□□□□□ -0.01
SHMT2-202ENST00000414700 UQCRBP14927 111 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 PNLIPRP1P54315 467 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 RBBP7Q16576 425 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 PRAMEF9Q5VWM5 478 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 MAVSQ7Z434 540 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 SYVN1Q86TM6 617 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 SATL1Q86VE3 508 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 SLC25A45Q8N413 288 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 SFRP1Q8N474 314 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 OR2I1PQ8NGU4 316 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 PIWIL2Q8TC59 973 aaKnown RBP15□□□□□ -0.01
SHMT2-202ENST00000414700 ATL1Q8WXF7 558 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 DGCR14Q96DF8 476 aaKnown RBP15□□□□□ -0.01
SHMT2-202ENST00000414700 ILKAPQ9H0C8 392 aaPredicted RBP15□□□□□ -0.01
SHMT2-202ENST00000414700 MVB12BQ9H7P6 319 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 ERVMER34-1Q9H9K5 563 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 ICKQ9UPZ9 632 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 SH2B3Q9UQQ2 575 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 PCDH15Q96QU1 1955 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 CAPN14A8MX76 684 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 KATNA1O75449 491 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 ERGP11308 486 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 SERPINB5P36952 375 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 ERVPABLB-1P60509 514 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 TRAF3Q13114 568 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 C1orf146Q5VVC0 180 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 LETMD1Q6P1Q0 360 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 B3GNT6Q6ZMB0 384 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 THOC6Q86W42 341 aaKnown RBP15□□□□□ -0.01
SHMT2-202ENST00000414700 ZNF761Q86XN6 746 aaPredicted RBP15□□□□□ -0.01
SHMT2-202ENST00000414700 RBM15BQ8NDT2 890 aaKnown RBP15□□□□□ -0.01
SHMT2-202ENST00000414700 NMD3Q96D46 503 aaKnown RBP15□□□□□ -0.01
SHMT2-202ENST00000414700 TRMOQ9BU70 441 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 NMUR2Q9GZQ4 415 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 CAPN10Q9HC96 672 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 CPNE7Q9UBL6 633 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 DOLKQ9UPQ8 538 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 MUC6Q6W4X9 2439 aa15□□□□□ -0.01
SHMT2-202ENST00000414700 LMO7DNF2Z398 122 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 OR4F21O95013 312 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 EPB42P16452 691 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 PSMB5P28074 263 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 ARL1P40616 181 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-202ENST00000414700 CPA2P48052 419 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 MAZP56270 477 aaKnown RBP14.99□□□□□ -0.01
SHMT2-202ENST00000414700 UBE2IP63279 158 aaKnown RBP14.99□□□□□ -0.01
SHMT2-202ENST00000414700 GALNT1Q10472 559 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-202ENST00000414700 PRKAA1Q13131 559 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 GPR18Q14330 331 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 DUOXA1Q1HG43 343 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 TRIM61Q5EBN2 209 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 LRRC70Q7Z2Q7 622 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 DHDDSQ86SQ9 333 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 GKN2Q86XP6 184 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 PPP1R36Q96LQ0 422 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 ACAT2Q9BWD1 397 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 KIR3DX1Q9H7L2 352 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 ARMCX1Q9P291 453 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 SLC7A8Q9UHI5 535 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 TAGLN3Q9UI15 199 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 ANGPTL3Q9Y5C1 460 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 HEBP2Q9Y5Z4 205 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 COLEC10Q9Y6Z7 277 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 A0A0J9YVX5 310 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 ENO1P06733 434 aaKnown RBP14.99□□□□□ -0.01
SHMT2-202ENST00000414700 GIMD1P0DJR0 217 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms