RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 EXT1Q16394 746 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 ZER1Q7Z7L7 766 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 CERS3Q8IU89 383 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 SLC39A11Q8N1S5 342 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 LINC00612Q8N6U2 182 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 POM121L12Q8N7R1 296 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 OR7A2PQ8NGA2 310 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 OR10Q1Q8NGQ4 319 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 FAM71F1Q96KD3 344 aaPredicted RBP4.28□□□□□ -1.72
ATG4C-204ENST00000414558 ZNF830Q96NB3 372 aaPredicted RBP4.28□□□□□ -1.72
ATG4C-204ENST00000414558 LGMNQ99538 433 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 RPP25Q9BUL9 199 aaKnown RBP4.28□□□□□ -1.72
ATG4C-204ENST00000414558 TDRD1Q9BXT4 1180 aaKnown RBP4.28□□□□□ -1.72
ATG4C-204ENST00000414558 PRRG4Q9BZD6 226 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 CCDC68Q9H2F9 335 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 Q9H8V8 135 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 CHORDC1Q9UHD1 332 aaPredicted RBP4.28□□□□□ -1.72
ATG4C-204ENST00000414558 CPSF3Q9UKF6 684 aaKnown RBP4.28□□□□□ -1.72
ATG4C-204ENST00000414558 RARRES3Q9UL19 164 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 PA2G4Q9UQ80 394 aaKnown RBP4.28□□□□□ -1.72
ATG4C-204ENST00000414558 WDR83OSQ9Y284 106 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 SNX8Q9Y5X2 465 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 ABCB1P08183 1280 aaPredicted RBP4.27□□□□□ -1.73
ATG4C-204ENST00000414558 IRX4P78413 519 aa4.27□□□□□ -1.73
ATG4C-204ENST00000414558 SGCGQ13326 291 aa4.27□□□□□ -1.73
ATG4C-204ENST00000414558 VEZF1Q14119 521 aa4.27□□□□□ -1.73
ATG4C-204ENST00000414558 SLC25A30Q5SVS4 291 aa4.27□□□□□ -1.73
ATG4C-204ENST00000414558 OR4A47Q6IF82 309 aa4.27□□□□□ -1.73
ATG4C-204ENST00000414558 CHMP1BQ7LBR1 199 aa4.27□□□□□ -1.73
ATG4C-204ENST00000414558 TTC30BQ8N4P2 665 aa4.27□□□□□ -1.73
ATG4C-204ENST00000414558 ATP8B4Q8TF62 1192 aa4.27□□□□□ -1.73
ATG4C-204ENST00000414558 DGAT2Q96PD7 388 aa4.27□□□□□ -1.73
ATG4C-204ENST00000414558 OVOL2Q9BRP0 275 aa4.27□□□□□ -1.73
ATG4C-204ENST00000414558 NOL11Q9H8H0 719 aaKnown RBP4.27□□□□□ -1.73
ATG4C-204ENST00000414558 MTHFD2LQ9H903 347 aaPredicted RBP4.27□□□□□ -1.73
ATG4C-204ENST00000414558 PIH1D3Q9NQM4 214 aaKnown RBP4.27□□□□□ -1.73
ATG4C-204ENST00000414558 HAO2Q9NYQ3 351 aa4.27□□□□□ -1.73
ATG4C-204ENST00000414558 RPS6KL1Q9Y6S9 549 aa4.27□□□□□ -1.73
ATG4C-204ENST00000414558 TRBV5-5A0A0J9YX44 114 aa4.26□□□□□ -1.73
ATG4C-204ENST00000414558 LHX1P48742 406 aa4.26□□□□□ -1.73
ATG4C-204ENST00000414558 TRAP1Q12931 704 aaKnown RBP4.26□□□□□ -1.73
ATG4C-204ENST00000414558 TRIM29Q14134 588 aa4.26□□□□□ -1.73
ATG4C-204ENST00000414558 PTPN14Q15678 1187 aa4.26□□□□□ -1.73
ATG4C-204ENST00000414558 SPATA1Q5VX52 437 aa4.26□□□□□ -1.73
ATG4C-204ENST00000414558 MZT2BQ6NZ67 158 aa4.26□□□□□ -1.73
ATG4C-204ENST00000414558 GDPGP1Q6ZNW5 385 aa4.26□□□□□ -1.73
ATG4C-204ENST00000414558 ZFAND4Q86XD8 727 aa4.26□□□□□ -1.73
ATG4C-204ENST00000414558 FAM89BQ8N5H3 189 aa4.26□□□□□ -1.73
ATG4C-204ENST00000414558 NOA1Q8NC60 698 aaKnown RBP4.26□□□□□ -1.73
ATG4C-204ENST00000414558 C9orf43Q8TAL5 461 aaPredicted RBP4.26□□□□□ -1.73
ATG4C-204ENST00000414558 ATXN7L3BQ96GX2 97 aa4.26□□□□□ -1.73
ATG4C-204ENST00000414558 GCNAQ96QF7 691 aa4.26□□□□□ -1.73
ATG4C-204ENST00000414558 ABHD1Q96SE0 405 aa4.26□□□□□ -1.73
ATG4C-204ENST00000414558 CCDC3Q9BQI4 270 aa4.26□□□□□ -1.73
ATG4C-204ENST00000414558 MXD3Q9BW11 206 aa4.26□□□□□ -1.73
ATG4C-204ENST00000414558 CCDC106Q9BWC9 280 aa4.26□□□□□ -1.73
ATG4C-204ENST00000414558 OLAHQ9NV23 265 aa4.26□□□□□ -1.73
ATG4C-204ENST00000414558 SELENOKQ9Y6D0 94 aa4.26□□□□□ -1.73
ATG4C-204ENST00000414558 WDHD1O75717 1129 aaPredicted RBP4.25□□□□□ -1.73
ATG4C-204ENST00000414558 SAGP10523 405 aaPredicted RBP4.25□□□□□ -1.73
ATG4C-204ENST00000414558 ITIH1P19827 911 aa4.25□□□□□ -1.73
ATG4C-204ENST00000414558 PIK3R1P27986 724 aa4.25□□□□□ -1.73
ATG4C-204ENST00000414558 PDHA2P29803 388 aa4.25□□□□□ -1.73
ATG4C-204ENST00000414558 SOX3P41225 446 aa4.25□□□□□ -1.73
ATG4C-204ENST00000414558 OR3A2P47893 321 aa4.25□□□□□ -1.73
ATG4C-204ENST00000414558 ASCL1P50553 236 aa4.25□□□□□ -1.73
ATG4C-204ENST00000414558 TMEM132DQ14C87 1099 aa4.25□□□□□ -1.73
ATG4C-204ENST00000414558 HIGD2BQ4VC39 106 aa4.25□□□□□ -1.73
ATG4C-204ENST00000414558 C6orf163Q5TEZ5 329 aa4.25□□□□□ -1.73
ATG4C-204ENST00000414558 Q6ZR54 194 aa4.25□□□□□ -1.73
ATG4C-204ENST00000414558 FCRLAQ7L513 359 aa4.25□□□□□ -1.73
ATG4C-204ENST00000414558 SLC47A2Q86VL8 602 aa4.25□□□□□ -1.73
ATG4C-204ENST00000414558 RYBPQ8N488 228 aaPredicted RBP4.25□□□□□ -1.73
ATG4C-204ENST00000414558 C11orf45Q8TAV5 145 aa4.25□□□□□ -1.73
ATG4C-204ENST00000414558 MAP3K3Q99759 626 aa4.25□□□□□ -1.73
ATG4C-204ENST00000414558 PUS3Q9BZE2 481 aaKnown RBP4.25□□□□□ -1.73
ATG4C-204ENST00000414558 CDH20Q9HBT6 801 aa4.25□□□□□ -1.73
ATG4C-204ENST00000414558 IGSF1Q8N6C5 1336 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 hCG_1809904A0A1W2PP81 198 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 A0A1W2PPE2 198 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 A0A1W2PR64 198 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 ACOD1A6NK06 481 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 A8MXK9 166 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 TRIM77I1YAP6 450 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 BCL2L11O43521 198 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 PGM3O95394 542 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 ATP1B1P05026 303 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 ELAVL4P26378 380 aaKnown RBP4.24□□□□□ -1.73
ATG4C-204ENST00000414558 ACTN2P35609 894 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 CAPGP40121 348 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 LIMK2P53671 638 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 IL11RAQ14626 422 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 PTPRCAPQ14761 206 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 NPTX1Q15818 432 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 GPR33Q49SQ1 333 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 LCLAT1Q6UWP7 414 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 CAMKMTQ7Z624 323 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 ABHD12Q8N2K0 398 aa4.24□□□□□ -1.73
ATG4C-204ENST00000414558 FBXL16Q8N461 479 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms