RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 NOL4O94818 638 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 MATN4O95460 622 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 KRT75O95678 551 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 F10P00742 488 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 MBP02144 154 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 GBAP04062 536 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 CALB1P05937 261 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 SRPRAP08240 638 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 MMP3P08254 477 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 PLEKP08567 350 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 SLC35E2BP0CK96 405 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 SLC35E2P0CK97 266 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 C8orf89P0DMQ9 161 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 MTHFD2P13995 350 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 RPA2P15927 270 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 ACO1P21399 889 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 CYP2F1P24903 491 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 TEAD1P28347 426 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 HSD11B1P28845 292 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 MC5RP33032 325 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 CD80P33681 288 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 BCL6P41182 706 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 ACTR1BP42025 376 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 WASP42768 502 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 GPD2P43304 727 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 RPS5P46782 204 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 HOXA1P49639 335 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 CSNK1EP49674 416 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 CDK9P50750 372 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 AP3S2P59780 193 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 UBE2G2P60604 165 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 RPS16P62249 146 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 ARF6P62330 175 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 MRPS9P82933 396 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 RELAQ04206 551 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 RAD51Q06609 339 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 ATP1A4Q13733 1029 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 RCAN2Q14206 197 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 KCNJ12Q14500 433 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 CYTH1Q15438 398 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 SSX2Q16385 188 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 STX1AQ16623 288 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 TAZQ16635 292 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 SYT16Q17RD7 645 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 USP41Q3LFD5 358 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 PDLIM3Q53GG5 364 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 LBHQ53QV2 105 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 CCDC157Q569K6 752 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 TMEM41BQ5BJD5 291 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 C3orf38Q5JPI3 329 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 PRR31Q5SQ13 230 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 ATF7IP2Q5U623 682 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 KRT79Q5XKE5 535 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 PLCXD3Q63HM9 321 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 ZNF470Q6ECI4 717 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 OR5M10Q6IEU7 315 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 FSTL4Q6MZW2 842 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 TTI2Q6NXR4 508 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 C5orf46Q6UWT4 87 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 WASH2PQ6VEQ5 465 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 WDR88Q6ZMY6 472 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 KCTD8Q6ZWB6 473 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 PARS2Q7L3T8 475 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 CXXC5Q7LFL8 322 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 ZNF551Q7Z340 670 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 GDF7Q7Z4P5 450 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 GPR141Q7Z602 305 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 YTHDF3Q7Z739 585 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 LHFPL4Q7Z7J7 247 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 ZNF761Q86XN6 746 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 VRK2Q86Y07 508 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 ECHDC2Q86YB7 292 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 MMAAQ8IVH4 418 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 VSTM4Q8IW00 320 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 C17orf78Q8N4C9 275 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 ZGPATQ8N5A5 531 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 LRRC17Q8N6Y2 441 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 VGLL2Q8N8G2 317 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 FADS6Q8N9I5 356 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 PSD4Q8NDX1 1056 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 RDM1Q8NG50 284 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 OR10J5Q8NHC4 309 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 SUN3Q8TAQ9 357 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 DTX3LQ8TDB6 740 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 RNASE8Q8TDE3 154 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 GPX8Q8TED1 209 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 KCTD4Q8WVF5 259 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 KBTBD7Q8WVZ9 684 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 CACNG8Q8WXS5 425 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 ELMO1Q92556 727 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 PHYHIPQ92561 330 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 NUDT11Q96G61 164 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 OXNAD1Q96HP4 312 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 DYDC2Q96IM9 177 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 CASD1Q96PB1 797 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 PCYT2Q99447 389 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 HSD17B14Q9BPX1 270 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 FAM110AQ9BQ89 295 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 SH2D3AQ9BRG2 576 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 WDR83Q9BRX9 315 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms