RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ARFGAP1Q8N6T3 406 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 SLC22A17Q8WUG5 538 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 KHSRPQ92945 711 aaKnown RBP eCLIP9.14□□□□□ -0.954e-29■■■■■ 27.3
SNHG3-201ENST00000413987 HDAC11Q96DB2 347 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 TSPAN17Q96FV3 270 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 ELF4Q99607 663 aaPredicted RBP9.14□□□□□ -0.95
SNHG3-201ENST00000413987 SLC4A5Q9BY07 1137 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 COG4Q9H9E3 785 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 CXorf21Q9HAI6 301 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 MARCH4Q9P2E8 410 aaPredicted RBP9.14□□□□□ -0.95
SNHG3-201ENST00000413987 DSEQ9UL01 958 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 KCNK7Q9Y2U2 307 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 HRH3Q9Y5N1 445 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 HS3ST4Q9Y661 456 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 VCANP13611 3396 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 ACOT8O14734 319 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 OAZ2O95190 189 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 AK1P00568 194 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 OPN1LWP04000 364 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 SNRPB2P08579 225 aaKnown RBP9.13□□□□□ -0.95
SNHG3-201ENST00000413987 CNPP09543 421 aaKnown RBP9.13□□□□□ -0.95
SNHG3-201ENST00000413987 CYP2A7P20853 494 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 FGFR3P22607 806 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 PSMA2P25787 234 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 EPHA3P29320 983 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 POU3F4P49335 361 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 SLC25A11Q02978 314 aaKnown RBP9.13□□□□□ -0.95
SNHG3-201ENST00000413987 NAB1Q13506 487 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 PEX6Q13608 980 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 ATP1A4Q13733 1029 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 TFDP2Q14188 446 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 NR1D2Q14995 579 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 NOMO1Q15155 1222 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 MED22Q15528 200 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 NRF1Q16656 503 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 TRIM16LQ309B1 348 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 DCAF6Q58WW2 860 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 PPP6R3Q5H9R7 873 aaPredicted RBP9.13□□□□□ -0.95
SNHG3-201ENST00000413987 CACHD1Q5VU97 1274 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 TTC33Q6PID6 262 aaPredicted RBP9.13□□□□□ -0.95
SNHG3-201ENST00000413987 ELMOD2Q8IZ81 293 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 CPSF7Q8N684 471 aaKnown RBP9.13□□□□□ -0.95
SNHG3-201ENST00000413987 PACRGLQ8N7B6 248 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 COLGALT1Q8NBJ5 622 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.13□□□□□ -0.953e-23■■■□□ 18.2
SNHG3-201ENST00000413987 RGMAQ96B86 450 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 MCRS1Q96EZ8 462 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 DUS3LQ96G46 650 aaKnown RBP9.13□□□□□ -0.95
SNHG3-201ENST00000413987 MAGEB5Q9BZ81 275 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 ULBP1Q9BZM6 244 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 WDR41Q9HAD4 459 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 PARVBQ9HBI1 364 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 MRPS2Q9Y399 296 aaKnown RBP9.13□□□□□ -0.95
SNHG3-201ENST00000413987 RWDD3Q9Y3V2 267 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 PDE4DIPQ5VU43 2346 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 A0A096LPE4 126 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 A0A1B0GTW7 788 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 A0A1W2PPZ6 126 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 HMX2A2RU54 273 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 YJEFN3A6XGL0 299 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 HHLA1C9JL84 531 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 H3BMQ9 156 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 PFDN6O15212 129 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 HRO43593 1189 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 AVILO75366 819 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 ALOX5P09917 674 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 BMP1P13497 986 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 SAT1P21673 171 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 IL1R2P27930 398 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 MS4A2Q01362 244 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 TNFRSF17Q02223 184 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 CEACAM7Q14002 265 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 STILQ15468 1287 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 SLC9B1Q4ZJI4 515 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 FAM182AQ5T1J6 154 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 HEPHL1Q6MZM0 1159 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 OGFOD2Q6N063 350 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 LYSMD3Q7Z3D4 306 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 C10orf107Q8IVU9 208 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 SLC39A11Q8N1S5 342 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 FAM160A2Q8N612 972 aaPredicted RBP9.13□□□□□ -0.95
SNHG3-201ENST00000413987 RXFP2Q8WXD0 754 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 CORO2AQ92828 525 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 ASB9Q96DX5 294 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 LRRC46Q96FV0 321 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 SMARCD1Q96GM5 515 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 ZNF558Q96NG5 402 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 FCRL4Q96PJ5 515 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 EBNA1BP2Q99848 306 aaKnown RBP9.13□□□□□ -0.95
SNHG3-201ENST00000413987 TMEM175Q9BSA9 504 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 ZSCAN5AQ9BUG6 496 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 CACNG6Q9BXT2 260 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 FAM124BQ9H5Z6 455 aaPredicted RBP9.13□□□□□ -0.95
SNHG3-201ENST00000413987 SYTL2Q9HCH5 934 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 NGBQ9NPG2 151 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 ANKMY1Q9P2S6 941 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 COPG2Q9UBF2 871 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 NUDT5Q9UKK9 219 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 EMCNQ9ULC0 261 aa9.13□□□□□ -0.95
SNHG3-201ENST00000413987 DMRT1Q9Y5R6 373 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms