RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 MRFAP1Q9Y605 127 aa9.1□□□□□ -0.95
RFFL-203ENST00000413582 HYKKA2RU49 373 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 OR5H15A6NDH6 313 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 IDSB3KWA1 339 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 QSOX1O00391 747 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 NRP2O60462 931 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 ZRANB2O95218 330 aaKnown RBP eCLIP9.09□□□□□ -0.95
RFFL-203ENST00000413582 UQCRHP07919 91 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 ITGAMP11215 1152 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 CD9P21926 228 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 RBL1P28749 1068 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 PTPN7P35236 360 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 VSX2P58304 361 aaPredicted RBP9.09□□□□□ -0.95
RFFL-203ENST00000413582 CSNK1G2P78368 415 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 PLOD1Q02809 727 aaPredicted RBP9.09□□□□□ -0.95
RFFL-203ENST00000413582 CKAP4Q07065 602 aaKnown RBP9.09□□□□□ -0.95
RFFL-203ENST00000413582 GRB7Q14451 532 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 ITIH4Q14624 930 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 FAM214AQ32MH5 1076 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 DNAJC21Q5F1R6 531 aaKnown RBP9.09□□□□□ -0.95
RFFL-203ENST00000413582 TFDP3Q5H9I0 405 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 WASHC2DQ5SRD0 308 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 FRMPD2BQ6IN97 320 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 PRMT9Q6P2P2 845 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 ZNF572Q7Z3I7 529 aaPredicted RBP9.09□□□□□ -0.95
RFFL-203ENST00000413582 LAPTM4BQ86VI4 370 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 DCUN1D3Q8IWE4 304 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 AMER2Q8N7J2 671 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 CEP112Q8N8E3 955 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 MNS1Q8NEH6 495 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 OR2L8Q8NGY9 312 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 THAP3Q8WTV1 239 aaPredicted RBP9.09□□□□□ -0.95
RFFL-203ENST00000413582 GPR137Q96N19 417 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 ARNT2Q9HBZ2 717 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 NLE1Q9NVX2 485 aaPredicted RBP9.09□□□□□ -0.95
RFFL-203ENST00000413582 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.09□□□□□ -0.95
RFFL-203ENST00000413582 CIDEBQ9UHD4 219 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 AAR2Q9Y312 384 aaKnown RBP9.09□□□□□ -0.95
RFFL-203ENST00000413582 NEU2Q9Y3R4 380 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 FAM169AQ9Y6X4 670 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 HCFC1P51610 2035 aa9.09□□□□□ -0.95
RFFL-203ENST00000413582 MAP1AP78559 2803 aaPredicted RBP9.09□□□□□ -0.96
RFFL-203ENST00000413582 FBN3Q75N90 2809 aa9.09□□□□□ -0.96
RFFL-203ENST00000413582 LOC102723996A0A087X1L8 192 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 LOC105369274A0A096LPK9 316 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 LOC102723532A0A0G2JNH3 316 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 FFAR3O14843 346 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 GPR42O15529 346 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 SRPX2O60687 465 aaPredicted RBP9.08□□□□□ -0.96
RFFL-203ENST00000413582 WFS1O76024 890 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 FKBP9O95302 570 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 FBLP22087 321 aaKnown RBP9.08□□□□□ -0.96
RFFL-203ENST00000413582 EMP2P54851 167 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 SPARCL1Q14515 664 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 PCOLCEQ15113 449 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 ZNF766Q5HY98 468 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 ANKRD20A2Q5SQ80 823 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 SEL1L2Q5TEA6 688 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 ANKRD20A1Q5TYW2 823 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 ABHD17BQ5VST6 288 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 ANKRD20A3Q5VUR7 823 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 AADACL2Q6P093 401 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 MEX3BQ6ZN04 569 aaKnown RBP9.08□□□□□ -0.96
RFFL-203ENST00000413582 NEK10Q6ZWH5 1172 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 RNF44Q7L0R7 432 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 CREG2Q8IUH2 290 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 VRK3Q8IV63 474 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 CCDC50Q8IVM0 306 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 KLHDC8BQ8IXV7 354 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 SLC22A15Q8IZD6 547 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 OR4N4Q8N0Y3 316 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 SUN3Q8TAQ9 357 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 CDKN2AIPNLQ96HQ2 116 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 TBL1YQ9BQ87 522 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 ZNF700Q9H0M5 742 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 C14orf105Q9NVL8 296 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 STOX2Q9P2F5 926 aaPredicted RBP9.08□□□□□ -0.96
RFFL-203ENST00000413582 FEZ2Q9UHY8 353 aaPredicted RBP9.08□□□□□ -0.96
RFFL-203ENST00000413582 KLK4Q9Y5K2 254 aa9.08□□□□□ -0.96
RFFL-203ENST00000413582 FLNAP21333 2647 aaKnown RBP9.08□□□□□ -0.96
RFFL-203ENST00000413582 DNAJC13O75165 2243 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 OR51F1A6NGY5 319 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 TARM1B6A8C7 271 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 H7C0C1 242 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 APOC4-APOC2K7ER74 178 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 PGRMC1O00264 195 aaKnown RBP9.07□□□□□ -0.96
RFFL-203ENST00000413582 RASGRF2O14827 1237 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 NADKO95544 446 aaPredicted RBP9.07□□□□□ -0.96
RFFL-203ENST00000413582 APOC2P02655 101 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 IGFBP2P18065 325 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 CXCR2P25025 360 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 PSMA3P25788 255 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 PSMB5P28074 263 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 FOXN2P32314 431 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 ATP5OP48047 213 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 EFNA3P52797 238 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 ART1P52961 327 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 CSE1LP55060 971 aaKnown RBP9.07□□□□□ -0.96
RFFL-203ENST00000413582 ZNF33BQ06732 778 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 PRPSAP1Q14558 356 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms