RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 RAD9AQ99638 391 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 CDADC1Q9BWV3 514 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 C6orf62Q9GZU0 229 aaPredicted RBP17.12■□□□□ 0.33
SDCBP-202ENST00000413219 SLC32A1Q9H598 525 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 SIAEQ9HAT2 523 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 SIRT5Q9NXA8 310 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 RAPGEFL1Q9UHV5 662 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 A0A1B0GVM2 712 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 SERTM1A2A2V5 107 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 DSCR3O14972 297 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 DIRAS1O95057 198 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 EPN2O95208 641 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 CDK1P06493 297 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 ANXA5P08758 320 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 ITGALP20701 1170 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 ETV6P41212 452 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 CPSF6Q16630 551 aaKnown RBP eCLIP17.11■□□□□ 0.33
SDCBP-202ENST00000413219 PRSS36Q5K4E3 855 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 NEK5Q6P3R8 708 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 VTCN1Q7Z7D3 282 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 PTOV1Q86YD1 416 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 MMAAQ8IVH4 418 aaKnown RBP17.11■□□□□ 0.33
SDCBP-202ENST00000413219 BOCQ9BWV1 1114 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 SPATA9Q9BWV2 254 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 LATS2Q9NRM7 1088 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 LHX3Q9UBR4 397 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 PCDHGA3Q9Y5H0 932 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 PEX16Q9Y5Y5 336 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 PRSS21Q9Y6M0 314 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 A0A0U1RQS6 177 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 TSPAN3O60637 253 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 PRMT3O60678 531 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 MED26O95402 600 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 CD160O95971 181 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 CBSLP0DN79 551 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 DBTP11182 482 aaKnown RBP17.11■□□□□ 0.33
SDCBP-202ENST00000413219 CTPS1P17812 591 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 ENGP17813 658 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 EPORP19235 508 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 TACR1P25103 407 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 CBSP35520 551 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 GGT2P36268 569 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 ATP5C1P36542 298 aaKnown RBP17.11■□□□□ 0.33
SDCBP-202ENST00000413219 OR1G1P47890 313 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 SEPHS1P49903 392 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 ARF5P84085 180 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 SRSF11Q05519 484 aaKnown RBP17.11■□□□□ 0.33
SDCBP-202ENST00000413219 TWF1Q12792 350 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 IQCCQ4KMZ1 466 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 OR4F3Q6IEY1 312 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 FAM151BQ6UXP7 276 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 LRRC70Q7Z2Q7 622 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 DNAJC22Q8N4W6 341 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 PARP16Q8N5Y8 322 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 FAM83FQ8NEG4 500 aaPredicted RBP17.11■□□□□ 0.33
SDCBP-202ENST00000413219 MYOCQ99972 504 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 ELOVL6Q9H5J4 265 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 CWH43Q9H720 699 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 NPAP1Q9NZP6 1156 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 MKLN1Q9UL63 735 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 PCDHB9Q9Y5E1 797 aa17.11■□□□□ 0.33
SDCBP-202ENST00000413219 KCNE1BA0A087WTH5 132 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 PNMA8CA0A1B0GUJ8 204 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 MTMR11A4FU01 709 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 CLCA1A8K7I4 914 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 FPGTO14772 594 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 B3GALT4O96024 378 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 SPNP16150 400 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 PRPS1L1P21108 318 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 LIMK1P53667 647 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 DEFA1P59665 94 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 DEFA3P59666 94 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 IFITM2Q01629 132 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 NFATC2Q13469 925 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 ARHGEF7Q14155 803 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 TOR1AIP1Q5JTV8 583 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 RNF219Q5W0B1 726 aaPredicted RBP17.1■□□□□ 0.33
SDCBP-202ENST00000413219 DESI1Q6ICB0 168 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 ZSWIM9Q86XI8 627 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 METTL4Q8N3J2 472 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 CSGALNACT1Q8TDX6 532 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 C7orf34Q96L11 122 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 FCRL1Q96LA6 429 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 CLSTN3Q9BQT9 956 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 TPK1Q9H3S4 243 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 ASB8Q9H765 288 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 KLHL42Q9P2K6 505 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.1■□□□□ 0.33
SDCBP-202ENST00000413219 PCDHGB3Q9Y5G1 929 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 MICAL3Q7RTP6 2002 aa17.1■□□□□ 0.33
SDCBP-202ENST00000413219 PARNO95453 639 aaKnown RBP17.09■□□□□ 0.33
SDCBP-202ENST00000413219 PRAMEF12O95522 483 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 EOMESO95936 686 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 ACRV1P26436 265 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 SEPT5Q99719 369 aaPredicted RBP17.09■□□□□ 0.33
SDCBP-202ENST00000413219 HTATIP2Q9BUP3 242 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 TTLL2Q9BWV7 592 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 SPASTQ9UBP0 616 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 RGS17Q9UGC6 210 aaPredicted RBP17.09■□□□□ 0.33
SDCBP-202ENST00000413219 PRG3Q9Y2Y8 225 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms