RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 TMEM126BQ8IUX1 230 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 MCATQ8IVS2 390 aaKnown RBP7.4□□□□□ -1.22
CPSF4-202ENST00000412686 NLGN4XQ8N0W4 816 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 OR4N4Q8N0Y3 316 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 ZNF655Q8N720 491 aaPredicted RBP7.4□□□□□ -1.22
CPSF4-202ENST00000412686 NLGN4YQ8NFZ3 816 aaPredicted RBP7.4□□□□□ -1.22
CPSF4-202ENST00000412686 OR56A3Q8NH54 315 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 OR2W6PQ8NHA6 318 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 EPS8L3Q8TE67 593 aaKnown RBP7.4□□□□□ -1.22
CPSF4-202ENST00000412686 AENQ8WTP8 325 aaKnown RBP7.4□□□□□ -1.22
CPSF4-202ENST00000412686 WNT2BQ93097 391 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 KIAA1191Q96A73 305 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 ZBTB9Q96C00 473 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 RHBDF1Q96CC6 855 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 FBXL8Q96CD0 374 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 TSNARE1Q96NA8 513 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 PRAP1Q96NZ9 151 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 TEFMQ96QE5 360 aaKnown RBP7.4□□□□□ -1.22
CPSF4-202ENST00000412686 ATOH8Q96SQ7 321 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 SGPP1Q9BX95 441 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 PARD6BQ9BYG5 372 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 TRIM54Q9BYV2 358 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 ASPSCR1Q9BZE9 553 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 SPNS1Q9H2V7 528 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 CPNE5Q9HCH3 593 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 RRAGDQ9NQL2 400 aaPredicted RBP7.4□□□□□ -1.22
CPSF4-202ENST00000412686 IRAK4Q9NWZ3 460 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 EURLQ9NYK6 297 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 TBK1Q9UHD2 729 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 ZNF180Q9UJW8 692 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 NOVA2Q9UNW9 492 aaKnown RBP7.4□□□□□ -1.22
CPSF4-202ENST00000412686 PLCL2Q9UPR0 1127 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 ACOT9Q9Y305 439 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 TMEM184BQ9Y519 407 aaPredicted RBP7.4□□□□□ -1.22
CPSF4-202ENST00000412686 IKBKGQ9Y6K9 419 aa7.4□□□□□ -1.22
CPSF4-202ENST00000412686 FER1L5A0AVI2 2057 aa7.4□□□□□ -1.23
CPSF4-202ENST00000412686 SPTBP11277 2137 aa7.4□□□□□ -1.23
CPSF4-202ENST00000412686 FRYQ5TBA9 3013 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 HEATR5BQ9P2D3 2071 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 A0A087X1B8 175 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 FEZF1A0PJY2 475 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 PABPN1LA6NDY0 278 aaKnown RBP7.39□□□□□ -1.23
CPSF4-202ENST00000412686 ZNF839A8K0R7 811 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 SUPT3HB4E1H0 165 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 E7EQ34 232 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 C3orf80F5H4A9 247 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 GOLGA8RI6L899 631 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 P2RX6O15547 441 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 RRP8O43159 456 aaKnown RBP7.39□□□□□ -1.23
CPSF4-202ENST00000412686 ZNF749O43361 778 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 SUPT3HO75486 399 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 RFPL1O75677 317 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 OR2B3O76000 313 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 WDR47O94967 919 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 SNRPAP09012 282 aaKnown RBP7.39□□□□□ -1.23
CPSF4-202ENST00000412686 MSL3P1P0C860 447 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 MTHFD2P13995 350 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 LIFP15018 202 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 NPPBP16860 134 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 CD82P27701 267 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 HSPA7P48741 367 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 AGTR2P50052 363 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 SERPINB9P50453 376 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 ITGA1P56199 1179 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 FOXL2P58012 376 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 VSX2P58304 361 aaPredicted RBP7.39□□□□□ -1.23
CPSF4-202ENST00000412686 ATP6V0D1P61421 351 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 CSNK1G2P78368 415 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 COL28A1Q2UY09 1125 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 TAF1BQ53T94 588 aaPredicted RBP7.39□□□□□ -1.23
CPSF4-202ENST00000412686 TECRLQ5HYJ1 363 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 MANEAQ5SRI9 462 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 CATSPEREQ5SY80 951 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 C1orf189Q5VU69 101 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 FAM69BQ5VUD6 431 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 CAPN13Q6MZZ7 669 aaPredicted RBP7.39□□□□□ -1.23
CPSF4-202ENST00000412686 WDR93Q6P2C0 686 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 FAM199XQ6PEV8 388 aaPredicted RBP7.39□□□□□ -1.23
CPSF4-202ENST00000412686 LCTLQ6UWM7 567 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 LRRC69Q6ZNQ3 347 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 RNF44Q7L0R7 432 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 TMPRSS11BQ86T26 416 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 THOC6Q86W42 341 aaKnown RBP7.39□□□□□ -1.23
CPSF4-202ENST00000412686 GPSM1Q86YR5 675 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 TMEM151BQ8IW70 566 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 CACNA2D3Q8IZS8 1091 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 CYP4X1Q8N118 509 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 METTL27Q8N6F8 245 aaPredicted RBP7.39□□□□□ -1.23
CPSF4-202ENST00000412686 IL22RA1Q8N6P7 574 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 ANKK1Q8NFD2 765 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 MZB1Q8WU39 189 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 ANKRD7Q92527 254 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 N4BP2L2Q92802 583 aaPredicted RBP7.39□□□□□ -1.23
CPSF4-202ENST00000412686 ISL2Q96A47 359 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 ZUFSPQ96AP4 578 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 KCTD12Q96CX2 325 aaKnown RBP7.39□□□□□ -1.23
CPSF4-202ENST00000412686 GPR78Q96P69 363 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 SELENOSQ9BQE4 189 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 PLCD4Q9BRC7 762 aa7.39□□□□□ -1.23
CPSF4-202ENST00000412686 ZPBPQ9BS86 351 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms