RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ST7LQ8TDW4 575 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 MTERF3Q96E29 417 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 ELMO2Q96JJ3 720 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 PPP3R2Q96LZ3 170 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 SFXN2Q96NB2 322 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 FCRL3Q96P31 734 aaPredicted RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 TREX2Q9BQ50 279 aaPredicted RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 C1QTNF1Q9BXJ1 281 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 RUVBL2Q9Y230 463 aaKnown RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 ALG5Q9Y673 324 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 FRMPD2Q68DX3 1309 aaPredicted RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 PHLPP1O60346 1717 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 A0A1W2PN81 502 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 POTEMA6NI47 508 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 AGAP5A6NIR3 686 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 UBE2CO00762 179 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 ADAMTS3O15072 1205 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 GABARAPO95166 117 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 GADD45GO95257 159 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 LYPLA2O95372 231 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 NR2F1P10589 423 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 UMPSP11172 480 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 PKMP14618 531 aaKnown RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 TATP17735 454 aaPredicted RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 PRPS1L1P21108 318 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 SPRP35270 261 aaPredicted RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 CHRNA7P36544 502 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 LIPAP38571 399 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 CAPGP40121 348 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 RBP2P50120 134 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 BCAMP50895 628 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 PKNOX1P55347 436 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 DYRK1AQ13627 763 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 GRIN2CQ14957 1233 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 LRRC26Q2I0M4 334 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 POTEGQ6S5H5 508 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 UNQ6494/PRO21346Q6UXR6 183 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 ABI3BPQ7Z7G0 1075 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 FAM35AQ86V20 835 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 RAB43Q86YS6 212 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 KATNAL2Q8IYT4 538 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 OR13J1Q8NGT2 312 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 GLYATL2Q8WU03 294 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 FOXRED1Q96CU9 486 aaPredicted RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 ZNF778Q96MU6 729 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 ZNF559Q9BR84 538 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 NXF2Q9GZY0 626 aaKnown RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 RIBC2Q9H4K1 309 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 FOLH1BQ9HBA9 442 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 PRDM5Q9NQX1 630 aaPredicted RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 RDH8Q9NYR8 311 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 GPR160Q9UJ42 338 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 U3KQV3 271 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 ARID2Q68CP9 1835 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 GNG14A0A1W2PPG7 69 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 NEMP2A6NFY4 417 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 SAC3D1A6NKF1 404 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 SULT1C2O00338 296 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 CRCPO75575 148 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 SPP1P10451 314 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 PAICSP22234 425 aaKnown RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 GALP22466 123 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 MAP2K4P45985 399 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 HSPA2P54652 639 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 ADPRHP54922 357 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 TFAMQ00059 246 aaKnown RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 GAD2Q05329 585 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 EN1Q05925 392 aaPredicted RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 NFIXQ14938 502 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 ZNHIT3Q15649 155 aaPredicted RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 ATP6AP1Q15904 470 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 RNF212Q495C1 297 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 RBM48Q5RL73 367 aaKnown RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 HEPHL1Q6MZM0 1159 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 JMJD6Q6NYC1 403 aaPredicted RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 FAM183BPQ6ZVS7 135 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 MAVSQ7Z434 540 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 LHFPL4Q7Z7J7 247 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 GPIHBP1Q8IV16 184 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 CEP97Q8IW35 865 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 C12orf45Q8N5I9 185 aaPredicted RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 SLC22A17Q8WUG5 538 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 CPA5Q8WXQ8 436 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 CENPIQ92674 756 aaPredicted RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 MUL1Q969V5 352 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 EEF2KMTQ96G04 330 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 SERAC1Q96JX3 654 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 RNF145Q96MT1 663 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 MAPKAP1Q9BPZ7 522 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 CPPED1Q9BRF8 314 aaPredicted RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 SH2D3AQ9BRG2 576 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 CEP41Q9BYV8 373 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 ASPSCR1Q9BZE9 553 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 OPA3Q9H6K4 179 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 PDE7BQ9NP56 450 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 WARS2Q9UGM6 360 aaKnown RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 ANAPC2Q9UJX6 822 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 TRPC5Q9UL62 973 aaPredicted RBP5.09□□□□□ -1.59
HERC4-205ENST00000412272 RPH3ALQ9UNE2 315 aa5.09□□□□□ -1.59
HERC4-205ENST00000412272 KPNA7A9QM74 516 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms