RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 ULBP3Q9BZM4 244 aa13.39□□□□□ -0.27
CPNE1-206ENST00000412056 PCBD2Q9H0N5 130 aa13.39□□□□□ -0.27
CPNE1-206ENST00000412056 NUDT4Q9NZJ9 180 aa13.39□□□□□ -0.27
CPNE1-206ENST00000412056 ANKMY1Q9P2S6 941 aa13.39□□□□□ -0.27
CPNE1-206ENST00000412056 PLCL2Q9UPR0 1127 aa13.39□□□□□ -0.27
CPNE1-206ENST00000412056 PLAAQ9Y263 795 aa13.39□□□□□ -0.27
CPNE1-206ENST00000412056 RAXQ9Y2V3 346 aa13.39□□□□□ -0.27
CPNE1-206ENST00000412056 IGF2RP11717 2491 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 MAP1BP46821 2468 aaKnown RBP13.38□□□□□ -0.27
CPNE1-206ENST00000412056 A0A0J9YVX5 310 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 TEX51A0A1B0GUA7 166 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 A0A1W2PPM1 405 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 TLDC2A0PJX2 215 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 H3BMH7 237 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 HAT1O14929 419 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 DLGAP3O95886 979 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 COL6A2P12110 1019 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 CDH1P12830 882 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 MTHFD2P13995 350 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 NPPBP16860 134 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 CD82P27701 267 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 SLC6A12P48065 614 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 HSPA7P48741 367 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 HNMTP50135 292 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 ITGA1P56199 1179 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 IFFO1Q0D2I5 559 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 COL9A2Q14055 689 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-206ENST00000412056 RASA2Q15283 850 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 TSNAXIP1Q2TAA8 658 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 CDKL4Q5MAI5 379 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 RNF44Q7L0R7 432 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 ADCK2Q7Z695 626 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 THOC6Q86W42 341 aaKnown RBP13.38□□□□□ -0.27
CPNE1-206ENST00000412056 BPHLQ86WA6 291 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-206ENST00000412056 TMEM126BQ8IUX1 230 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 MCATQ8IVS2 390 aaKnown RBP13.38□□□□□ -0.27
CPNE1-206ENST00000412056 KLHDC8AQ8IYD2 350 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 OR8K5Q8NH50 307 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 RHEBL1Q8TAI7 183 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 SCYL1Q96KG9 808 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 DCBLD2Q96PD2 775 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 HAUS8Q9BT25 410 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 SPRY4Q9C004 299 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 SPRTNQ9H040 489 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-206ENST00000412056 SYNPO2LQ9H987 977 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 PTBP2Q9UKA9 531 aaKnown RBP13.38□□□□□ -0.27
CPNE1-206ENST00000412056 PILRAQ9UKJ1 303 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 ZMIZ1Q9ULJ6 1067 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 SLC22A14Q9Y267 594 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 TMEM184BQ9Y519 407 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-206ENST00000412056 ASB1Q9Y576 335 aa13.38□□□□□ -0.27
CPNE1-206ENST00000412056 CEP295Q9C0D2 2601 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 CCDC189A1A4V9 331 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.37□□□□□ -0.27
CPNE1-206ENST00000412056 STMND1H3BQB6 276 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 H7BY64 318 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 CDH16O75309 829 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 WDR47O94967 919 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 LIPCP11150 499 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 KRT15P19012 456 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 TGIF1Q15583 401 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 ZC3H12BQ5HYM0 836 aaKnown RBP13.37□□□□□ -0.27
CPNE1-206ENST00000412056 FRMPD2BQ6IN97 320 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 TIPARPQ7Z3E1 657 aaKnown RBP13.37□□□□□ -0.27
CPNE1-206ENST00000412056 PLD3Q8IV08 490 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 TCAIMQ8N3R3 496 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 ZNF248Q8NDW4 579 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 ACMSDQ8TDX5 336 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 KCNE4Q8WWG9 221 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 TSNARE1Q96NA8 513 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 PRAP1Q96NZ9 151 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 ZFYVE21Q9BQ24 234 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 TMEM184CQ9NVA4 438 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 CPSF2Q9P2I0 782 aaKnown RBP13.37□□□□□ -0.27
CPNE1-206ENST00000412056 XPR1Q9UBH6 696 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 SERTAD3Q9UJW9 196 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 SNX7Q9UNH6 387 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 SCN3AQ9NY46 2000 aa13.37□□□□□ -0.27
CPNE1-206ENST00000412056 LOC105369274A0A096LPK9 316 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 LOC102723532A0A0G2JNH3 316 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 SYCE1LA8MT33 242 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 E7EQ34 232 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 TK2O00142 265 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 MAP2K7O14733 419 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 RAD1O60671 282 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 SCRG1O75711 98 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 OR2B3O76000 313 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 IPO13O94829 963 aaKnown RBP13.36□□□□□ -0.27
CPNE1-206ENST00000412056 MT-ND3P03897 115 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 NTRK1P04629 796 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 RBP1P09455 135 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 PYGBP11216 843 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 GGT5P36269 586 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 EIF2S3P41091 472 aaKnown RBP13.36□□□□□ -0.27
CPNE1-206ENST00000412056 AGTR2P50052 363 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 VSX2P58304 361 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-206ENST00000412056 CSNK1G2P78368 415 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 MEF2AQ02078 507 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-206ENST00000412056 CLN3Q13286 438 aa13.36□□□□□ -0.27
CPNE1-206ENST00000412056 CATSPEREQ5SY80 951 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms