RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 SRPK3Q9UPE1 567 aa29.86■■■□□ 2.37
TRAF3IP1-203ENST00000409739 PCDHGA6Q9Y5G7 932 aa29.86■■■□□ 2.37
TRAF3IP1-203ENST00000409739 COL9A2Q14055 689 aaPredicted RBP29.85■■■□□ 2.37
TRAF3IP1-203ENST00000409739 TSNQ15631 228 aaKnown RBP29.85■■■□□ 2.37
TRAF3IP1-203ENST00000409739 PTCHD3Q3KNS1 767 aa29.85■■■□□ 2.37
TRAF3IP1-203ENST00000409739 FRMPD2BQ6IN97 320 aa29.85■■■□□ 2.37
TRAF3IP1-203ENST00000409739 CMC1Q7Z7K0 106 aa29.85■■■□□ 2.37
TRAF3IP1-203ENST00000409739 PCBD2Q9H0N5 130 aa29.85■■■□□ 2.37
TRAF3IP1-203ENST00000409739 ENAMQ9NRM1 1142 aa29.85■■■□□ 2.37
TRAF3IP1-203ENST00000409739 CTNNAL1Q9UBT7 734 aa29.85■■■□□ 2.37
TRAF3IP1-203ENST00000409739 KCND3Q9UK17 655 aa29.85■■■□□ 2.37
TRAF3IP1-203ENST00000409739 SH2B3Q9UQQ2 575 aa29.85■■■□□ 2.37
TRAF3IP1-203ENST00000409739 CCDC166P0CW27 439 aa29.84■■■□□ 2.37
TRAF3IP1-203ENST00000409739 CCND1P24385 295 aa29.84■■■□□ 2.37
TRAF3IP1-203ENST00000409739 VSX2P58304 361 aaPredicted RBP29.84■■■□□ 2.37
TRAF3IP1-203ENST00000409739 RHDQ02161 417 aa29.84■■■□□ 2.37
TRAF3IP1-203ENST00000409739 TCTE1Q5JU00 501 aa29.84■■■□□ 2.37
TRAF3IP1-203ENST00000409739 FBXO42Q6P3S6 717 aa29.84■■■□□ 2.37
TRAF3IP1-203ENST00000409739 FAM198BQ6UWH4 519 aa29.84■■■□□ 2.37
TRAF3IP1-203ENST00000409739 SPATA6LQ8N4H0 392 aa29.84■■■□□ 2.37
TRAF3IP1-203ENST00000409739 OR56A3Q8NH54 315 aa29.84■■■□□ 2.37
TRAF3IP1-203ENST00000409739 ALKBH8Q96BT7 664 aaKnown RBP29.84■■■□□ 2.37
TRAF3IP1-203ENST00000409739 DHCR7Q9UBM7 475 aaKnown RBP29.84■■■□□ 2.37
TRAF3IP1-203ENST00000409739 OARD1Q9Y530 152 aa29.84■■■□□ 2.37
TRAF3IP1-203ENST00000409739 LOC105369274A0A096LPK9 316 aa29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 LOC102723532A0A0G2JNH3 316 aa29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 ZNF500O60304 480 aaPredicted RBP29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 KATNA1O75449 491 aa29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 BMPR2Q13873 1038 aa29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 UAP1Q16222 522 aaPredicted RBP29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 CAPN13Q6MZZ7 669 aaPredicted RBP29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 LCTLQ6UWM7 567 aa29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 OR4N4Q8N0Y3 316 aa29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 PROKR1Q8TCW9 393 aa29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 ATL1Q8WXF7 558 aa29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 TTC9Q92623 222 aa29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 PYCR2Q96C36 320 aa29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 UBXN10Q96LJ8 280 aa29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 GBP5Q96PP8 586 aa29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 DPH2Q9BQC3 489 aaPredicted RBP29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 NDC1Q9BTX1 674 aa29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 SYNPO2LQ9H987 977 aa29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 STARD5Q9NSY2 213 aa29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 SNX7Q9UNH6 387 aa29.83■■■□□ 2.37
TRAF3IP1-203ENST00000409739 NKX2-8O15522 239 aa29.82■■■□□ 2.36
TRAF3IP1-203ENST00000409739 SRPX2O60687 465 aaPredicted RBP29.82■■■□□ 2.36
TRAF3IP1-203ENST00000409739 SLC35E2BP0CK96 405 aa29.82■■■□□ 2.36
TRAF3IP1-203ENST00000409739 EZRP15311 586 aaKnown RBP29.82■■■□□ 2.36
TRAF3IP1-203ENST00000409739 CD1DP15813 335 aa29.82■■■□□ 2.36
TRAF3IP1-203ENST00000409739 GMPRP36959 345 aa29.82■■■□□ 2.36
TRAF3IP1-203ENST00000409739 CDKL1Q00532 357 aa29.82■■■□□ 2.36
TRAF3IP1-203ENST00000409739 CDC20Q12834 499 aa29.82■■■□□ 2.36
TRAF3IP1-203ENST00000409739 TEX35Q5T0J7 233 aa29.82■■■□□ 2.36
TRAF3IP1-203ENST00000409739 C1orf189Q5VU69 101 aa29.82■■■□□ 2.36
TRAF3IP1-203ENST00000409739 ADCK2Q7Z695 626 aa29.82■■■□□ 2.36
TRAF3IP1-203ENST00000409739 UBL7Q96S82 380 aaPredicted RBP29.82■■■□□ 2.36
TRAF3IP1-203ENST00000409739 GPR87Q9BY21 358 aa29.82■■■□□ 2.36
TRAF3IP1-203ENST00000409739 ACTL8Q9H568 366 aa29.82■■■□□ 2.36
TRAF3IP1-203ENST00000409739 TXLNGQ9NUQ3 528 aa29.82■■■□□ 2.36
TRAF3IP1-203ENST00000409739 HMX2A2RU54 273 aa29.81■■■□□ 2.36
TRAF3IP1-203ENST00000409739 FITM1A5D6W6 292 aa29.81■■■□□ 2.36
TRAF3IP1-203ENST00000409739 CAPN1P07384 714 aa29.81■■■□□ 2.36
TRAF3IP1-203ENST00000409739 PRKAR1AP10644 381 aa29.81■■■□□ 2.36
TRAF3IP1-203ENST00000409739 MC1RQ01726 317 aa29.81■■■□□ 2.36
TRAF3IP1-203ENST00000409739 CSHL1Q14406 222 aa29.81■■■□□ 2.36
TRAF3IP1-203ENST00000409739 GRM7Q14831 915 aa29.81■■■□□ 2.36
TRAF3IP1-203ENST00000409739 WASHC2DQ5SRD0 308 aa29.81■■■□□ 2.36
TRAF3IP1-203ENST00000409739 MROH9Q5TGP6 573 aa29.81■■■□□ 2.36
TRAF3IP1-203ENST00000409739 FRA10AC1Q70Z53 315 aa29.81■■■□□ 2.36
TRAF3IP1-203ENST00000409739 SLC44A1Q8WWI5 657 aa29.81■■■□□ 2.36
TRAF3IP1-203ENST00000409739 H7BY64 318 aa29.8■■■□□ 2.36
TRAF3IP1-203ENST00000409739 ERVH48-1M5A8F1 160 aa29.8■■■□□ 2.36
TRAF3IP1-203ENST00000409739 HAT1O14929 419 aa29.8■■■□□ 2.36
TRAF3IP1-203ENST00000409739 PTPN4P29074 926 aa29.8■■■□□ 2.36
TRAF3IP1-203ENST00000409739 RPS18P62269 152 aaKnown RBP29.8■■■□□ 2.36
TRAF3IP1-203ENST00000409739 RELAQ04206 551 aa29.8■■■□□ 2.36
TRAF3IP1-203ENST00000409739 CRTC2Q53ET0 693 aaPredicted RBP29.8■■■□□ 2.36
TRAF3IP1-203ENST00000409739 RAPH1Q70E73 1250 aa29.8■■■□□ 2.36
TRAF3IP1-203ENST00000409739 C17orf64Q86WR6 236 aa29.8■■■□□ 2.36
TRAF3IP1-203ENST00000409739 TTC29Q8NA56 475 aaPredicted RBP29.8■■■□□ 2.36
TRAF3IP1-203ENST00000409739 PTERQ96BW5 349 aa29.8■■■□□ 2.36
TRAF3IP1-203ENST00000409739 PRAP1Q96NZ9 151 aa29.8■■■□□ 2.36
TRAF3IP1-203ENST00000409739 OR4K3Q96R72 315 aa29.8■■■□□ 2.36
TRAF3IP1-203ENST00000409739 TMEM184CQ9NVA4 438 aa29.8■■■□□ 2.36
TRAF3IP1-203ENST00000409739 H0YGG7 62 aa29.79■■■□□ 2.36
TRAF3IP1-203ENST00000409739 ANXA5P08758 320 aa29.79■■■□□ 2.36
TRAF3IP1-203ENST00000409739 RAB40ALP0C0E4 278 aa29.79■■■□□ 2.36
TRAF3IP1-203ENST00000409739 FAM153BP0C7A2 387 aa29.79■■■□□ 2.36
TRAF3IP1-203ENST00000409739 NPPBP16860 134 aa29.79■■■□□ 2.36
TRAF3IP1-203ENST00000409739 AGXTP21549 392 aa29.79■■■□□ 2.36
TRAF3IP1-203ENST00000409739 HRH2P25021 359 aa29.79■■■□□ 2.36
TRAF3IP1-203ENST00000409739 CRABP2P29373 138 aa29.79■■■□□ 2.36
TRAF3IP1-203ENST00000409739 CSRP3P50461 194 aa29.79■■■□□ 2.36
TRAF3IP1-203ENST00000409739 ARSFP54793 590 aa29.79■■■□□ 2.36
TRAF3IP1-203ENST00000409739 ARF3P61204 181 aaPredicted RBP29.79■■■□□ 2.36
TRAF3IP1-203ENST00000409739 ATP6V0D1P61421 351 aa29.79■■■□□ 2.36
TRAF3IP1-203ENST00000409739 RPS15P62841 145 aaKnown RBP29.79■■■□□ 2.36
TRAF3IP1-203ENST00000409739 FAM153CQ494X1 144 aa29.79■■■□□ 2.36
TRAF3IP1-203ENST00000409739 ATP1A1-AS1Q5TC04 95 aa29.79■■■□□ 2.36
TRAF3IP1-203ENST00000409739 YOD1Q5VVQ6 348 aaPredicted RBP29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms