RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 OR2L8Q8NGY9 312 aa12.18□□□□□ -0.46
CHRNA1-203ENST00000409219 QKIQ96PU8 341 aaKnown RBP eCLIP12.18□□□□□ -0.46
CHRNA1-203ENST00000409219 TUBB6Q9BUF5 446 aa12.18□□□□□ -0.46
CHRNA1-203ENST00000409219 ANKRD10Q9NXR5 420 aa12.18□□□□□ -0.46
CHRNA1-203ENST00000409219 JMJD1CQ15652 2540 aa12.18□□□□□ -0.46
CHRNA1-203ENST00000409219 A8MUI8 341 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 QSOX1O00391 747 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 CST8O60676 142 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 ANXA9O76027 345 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 TOXO94900 526 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 ZWINTO95229 277 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 EIF2S1P05198 315 aaKnown RBP12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 CDKN2BP42772 138 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 CSE1LP55060 971 aaKnown RBP12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 MYBPHQ13203 477 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 FILIP1LQ4L180 1135 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 ACER2Q5QJU3 275 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 SPINK14Q6IE38 97 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 CEP128Q6ZU80 1094 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 TAOK1Q7L7X3 1001 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 GALNTL5Q7Z4T8 443 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 TMTC1Q8IUR5 882 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 VRK3Q8IV63 474 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 TAB3Q8N5C8 712 aaPredicted RBP12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 TMEM178AQ8NBL3 297 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 NANOS1Q8WY41 292 aaKnown RBP12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 CTNNBL1Q8WYA6 563 aaPredicted RBP12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 SYN2Q92777 582 aaPredicted RBP12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 ZUFSPQ96AP4 578 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 HAUS1Q96CS2 278 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 CABS1Q96KC9 395 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 NPAS2Q99743 824 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 MDFIQ99750 246 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 YIPF2Q9BWQ6 316 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 UCK2Q9BZX2 261 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 TGIF2Q9GZN2 237 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 LIME1Q9H400 295 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 ST6GALNAC2Q9UJ37 374 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 TRHDEQ9UKU6 1024 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 KLK4Q9Y5K2 254 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 CSPG4Q6UVK1 2322 aa12.17□□□□□ -0.46
CHRNA1-203ENST00000409219 IGHV3-20A0A0C4DH32 117 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 TARM1B6A8C7 271 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 KIF2AO00139 706 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 RASGRF2O14827 1237 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 SEC24DO94855 1032 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 FKBP9O95302 570 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 TUBB4AP04350 444 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 HOXD4P09016 255 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 CHRNB4P30926 498 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 CD96P40200 585 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 PLOD1Q02809 727 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 TAZQ16635 292 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 SYT16Q17RD7 645 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 PRTGQ2VWP7 1150 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 BTBD16Q32M84 506 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 DNAJC21Q5F1R6 531 aaKnown RBP12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 RNFT1Q5M7Z0 435 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 DENND5AQ6IQ26 1287 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 H3F3CQ6NXT2 135 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 Q71RC1 249 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 CD163Q86VB7 1156 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 DCUN1D3Q8IWE4 304 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 ZC3H7AQ8IWR0 971 aaKnown RBP12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 SLC22A15Q8IZD6 547 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 ASB5Q8WWX0 329 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 HDAC10Q969S8 669 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 ZNF354BQ96LW1 612 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 SMR3AQ99954 134 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 MKKSQ9NPJ1 570 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 MKL2Q9ULH7 1088 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 RNF6Q9Y252 685 aa12.16□□□□□ -0.46
CHRNA1-203ENST00000409219 PRPF4O43172 522 aaKnown RBP eCLIP12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 MAN1A2O60476 641 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 C8orf89P0DMQ9 161 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 ERVK-10P10266 1014 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 CD46P15529 392 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 ZNF24P17028 368 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 PSMB4P28070 264 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 PTGER1P34995 402 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 SLC26A3P40879 764 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 ADAM8P78325 824 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 TFDP2Q14188 446 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 FASTKQ14296 549 aaKnown RBP12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 ITIH4Q14624 930 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 LRRC38Q5VT99 294 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 KAZNQ674X7 775 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 PLAG1Q6DJT9 500 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 PACS1Q6VY07 963 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 LANCL3Q6ZV70 420 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 CRLF3Q8IUI8 442 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 TMEM139Q8IV31 216 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 TC2NQ8N9U0 490 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 FAM98AQ8NCA5 519 aaKnown RBP12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 MYRIPQ8NFW9 859 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 LILRB4Q8NHJ6 448 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 P3H4Q92791 437 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 MVB12AQ96EY5 273 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 MIPEPQ99797 713 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms