RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 DDX31Q9H8H2 851 aaKnown RBP4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 TRPC7Q9HCX4 862 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 PDRG1Q9NUG6 133 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 MAD2L2Q9UI95 211 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 TRMT6Q9UJA5 497 aaKnown RBP4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 KCNS2Q9ULS6 477 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 TDRKHQ9Y2W6 561 aaKnown RBP4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 JRKLQ9Y4A0 524 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 KLK4Q9Y5K2 254 aa4.57□□□□□ -1.68
HMGB1P13-201ENST00000406019 PLOD2O00469 737 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 ATP9AO75110 1047 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 CRCPO75575 148 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 RAD51DO75771 328 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 PDE9AO76083 593 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 ZBTB11O95625 1053 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 MOCS2O96007 188 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 ALPPP05187 535 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 PRSS2P07478 247 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 KRT19P08727 400 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 ABHD2P08910 425 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 FAM200BP0CF97 657 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 ALPPL2P10696 532 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 CKMT2P17540 419 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 HPDP32754 393 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 MAGEB1P43366 347 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 KCNJ4P48050 445 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 THOP1P52888 689 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 RELQ04864 619 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 DLG1Q12959 904 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 PDK1Q15118 436 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 DUOXA1Q1HG43 343 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 LRRC38Q5VT99 294 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 ZNF770Q6IQ21 691 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 C1orf186Q6ZWK4 172 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 ANKRD46Q86W74 232 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 AMIGO1Q86WK6 493 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 KMT5CQ86Y97 462 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 CFAP206Q8IYR0 622 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 CNNM3Q8NE01 707 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 OR4K1Q8NGD4 311 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 URGCPQ8TCY9 931 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 TMED6Q8WW62 240 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 AP2M1Q96CW1 435 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 FAM20AQ96MK3 541 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 GDAP1L1Q96MZ0 367 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 TSGA13Q96PP4 275 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 RASL10BQ96S79 203 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 ACPTQ9BZG2 426 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 CSTL1Q9H114 145 aa4.56□□□□□ -1.68
HMGB1P13-201ENST00000406019 CNTNAP2Q9UHC6 1331 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 SYCE3A1L190 88 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 FAM149AA5PLN7 773 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 PRSS46E5RG02 174 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 F8VVB4 439 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 F8VWA3 439 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 CACNB4O00305 520 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 TXNL1O43396 289 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 SNX3O60493 162 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 RPS6KA5O75582 802 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 DESP17661 470 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 CCNA2P20248 432 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 CYP2A7P20853 494 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 JAK1P23458 1154 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 AHCYP23526 432 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 PIK3R1P27986 724 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 GNL1P36915 607 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 CDKN1AP38936 164 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 MNDAP41218 407 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 RABIFP47224 123 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 PEX5P50542 639 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 GPC3P51654 580 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 ATXN3P54252 364 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 SULT2A1Q06520 285 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 DMPKQ09013 629 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 RASGEF1BQ0VAM2 473 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 MIER3Q7Z3K6 550 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 PIWIL4Q7Z3Z4 852 aaKnown RBP4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 GPR141Q7Z602 305 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 MMD2Q8IY49 270 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 CLEC1AQ8NC01 280 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 KIAA1524Q8TCG1 905 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 PIGBQ92521 554 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 THOC1Q96FV9 657 aaKnown RBP4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 CDKN2AIPNLQ96HQ2 116 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 ZNF385AQ96PM9 386 aaKnown RBP4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 ZNF559Q9BR84 538 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 CDK19Q9BWU1 502 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 PRRG4Q9BZD6 226 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 TSPYL1Q9H0U9 437 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 ABCG4Q9H172 646 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 ACTL8Q9H568 366 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 C6orf106Q9H6K1 298 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 UBTD1Q9HAC8 227 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 MAGEF1Q9HAY2 307 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 MRPL17Q9NRX2 175 aaKnown RBP4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 SPHK1Q9NYA1 384 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 TRIM10Q9UDY6 481 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 DAPK2Q9UIK4 370 aa4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 HOOK1Q9UJC3 728 aaKnown RBP4.55□□□□□ -1.68
HMGB1P13-201ENST00000406019 CGNL1Q0VF96 1302 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms