RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 LRRTM4Q86VH4 590 aa13.59□□□□□ -0.23
PRAME-205ENST00000405655 PLD3Q8IV08 490 aa13.59□□□□□ -0.23
PRAME-205ENST00000405655 MMP21Q8N119 569 aa13.59□□□□□ -0.23
PRAME-205ENST00000405655 C1orf52Q8N6N3 182 aaKnown RBP13.59□□□□□ -0.23
PRAME-205ENST00000405655 CGREF1Q99674 301 aa13.59□□□□□ -0.23
PRAME-205ENST00000405655 KCTD14Q9BQ13 255 aaPredicted RBP13.59□□□□□ -0.23
PRAME-205ENST00000405655 TEX101Q9BY14 249 aa13.59□□□□□ -0.23
PRAME-205ENST00000405655 EPS15L1Q9UBC2 864 aa13.59□□□□□ -0.23
PRAME-205ENST00000405655 NDRG2Q9UN36 371 aaKnown RBP13.59□□□□□ -0.23
PRAME-205ENST00000405655 SNX13Q9Y5W8 968 aa13.59□□□□□ -0.23
PRAME-205ENST00000405655 A0A0C4DFX4 3053 aa13.59□□□□□ -0.23
PRAME-205ENST00000405655 SCN2AQ99250 2005 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 TCRBV3S1A0A5B6 114 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 EME2A4GXA9 379 aaPredicted RBP13.58□□□□□ -0.24
PRAME-205ENST00000405655 EML2O95834 649 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 DNTTP04053 509 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 CEACAM5P06731 702 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 MRPL19P49406 292 aaKnown RBP13.58□□□□□ -0.24
PRAME-205ENST00000405655 PNLIPRP1P54315 467 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 CLCA4Q14CN2 919 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 MTX3Q5HYI7 312 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 PDSS2Q86YH6 399 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 CCL4L1Q8NHW4 92 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 WDR48Q8TAF3 677 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 N4BP2L2Q92802 583 aaPredicted RBP13.58□□□□□ -0.24
PRAME-205ENST00000405655 LINC00615Q96LM1 132 aaPredicted RBP13.58□□□□□ -0.24
PRAME-205ENST00000405655 INSM2Q96T92 566 aaPredicted RBP13.58□□□□□ -0.24
PRAME-205ENST00000405655 GABRG3Q99928 467 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 PRDM8Q9NQV8 689 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 SCHIP1Q9P0W5 487 aaPredicted RBP13.58□□□□□ -0.24
PRAME-205ENST00000405655 UTS2RQ9UKP6 389 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 GPR34Q9UPC5 381 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 GPSM3Q9Y4H4 160 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 AP4S1Q9Y587 144 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 FRYLO94915 3013 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 FANCMQ8IYD8 2048 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 SCN3AQ9NY46 2000 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 FEZF1A0PJY2 475 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 PLRG1O43660 514 aaKnown RBP13.58□□□□□ -0.24
PRAME-205ENST00000405655 C8BP07358 591 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 NDUFV2P19404 249 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 CASP9P55211 416 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 CYP4F2P78329 520 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 RHDQ02161 417 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 GRIK2Q13002 908 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 NRF1Q16656 503 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 TMEM259Q4ZIN3 620 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 METTL2BQ6P1Q9 378 aaKnown RBP13.58□□□□□ -0.24
PRAME-205ENST00000405655 MTSS1LQ765P7 747 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 ZNF551Q7Z340 670 aaPredicted RBP13.58□□□□□ -0.24
PRAME-205ENST00000405655 PDZD3Q86UT5 571 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 CLECL1Q8IZS7 167 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 FAM86B1Q8N7N1 296 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 OR10A6Q8NH74 314 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 MRGPRX1Q96LB2 322 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 C1QTNF2Q9BXJ5 285 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 KLHL4Q9C0H6 718 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 RPF2Q9H7B2 306 aaKnown RBP13.58□□□□□ -0.24
PRAME-205ENST00000405655 CARS2Q9HA77 564 aaKnown RBP13.58□□□□□ -0.24
PRAME-205ENST00000405655 FGF22Q9HCT0 170 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 SERHLQ9NQF3 203 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.58□□□□□ -0.24
PRAME-205ENST00000405655 SUFUQ9UMX1 484 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 PCDHB14Q9Y5E9 798 aa13.58□□□□□ -0.24
PRAME-205ENST00000405655 MDC1Q14676 2089 aaKnown RBP13.57□□□□□ -0.24
PRAME-205ENST00000405655 AP1G1O43747 822 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 HOXB3P14651 431 aaPredicted RBP13.57□□□□□ -0.24
PRAME-205ENST00000405655 CKMT2P17540 419 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 TRIM23P36406 574 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 MC1RQ01726 317 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 PWP1Q13610 501 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 MAPKAPK3Q16644 382 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 UGT8Q16880 541 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 HKDC1Q2TB90 917 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 OGFRL1Q5TC84 451 aaPredicted RBP13.57□□□□□ -0.24
PRAME-205ENST00000405655 LIPJQ5W064 366 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 METRNLQ641Q3 311 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 GRHL2Q6ISB3 625 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 CAPN13Q6MZZ7 669 aaPredicted RBP13.57□□□□□ -0.24
PRAME-205ENST00000405655 NUDT18Q6ZVK8 323 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 HID1Q8IV36 788 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 SFTPA2Q8IWL1 248 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 PNPT1Q8TCS8 783 aaKnown RBP13.57□□□□□ -0.24
PRAME-205ENST00000405655 SIPA1Q96FS4 1042 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 CMTM7Q96FZ5 175 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 LRGUKQ96M69 825 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 SEPHS2Q99611 448 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 SLC29A1Q99808 456 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 MACROD1Q9BQ69 325 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 IMP3Q9NV31 184 aaKnown RBP13.57□□□□□ -0.24
PRAME-205ENST00000405655 VPS29Q9UBQ0 182 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 TAC3Q9UHF0 121 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 KLHL20Q9Y2M5 609 aa13.57□□□□□ -0.24
PRAME-205ENST00000405655 KLHL18O94889 574 aa13.56□□□□□ -0.24
PRAME-205ENST00000405655 MYCLP1P12525 358 aaPredicted RBP13.56□□□□□ -0.24
PRAME-205ENST00000405655 HSD17B1P14061 328 aa13.56□□□□□ -0.24
PRAME-205ENST00000405655 ACADSP16219 412 aa13.56□□□□□ -0.24
PRAME-205ENST00000405655 AK4P27144 223 aaPredicted RBP13.56□□□□□ -0.24
PRAME-205ENST00000405655 RPS21P63220 83 aaKnown RBP13.56□□□□□ -0.24
PRAME-205ENST00000405655 PRSS53Q2L4Q9 553 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms