RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 TBC1D3LB9A6J9 549 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 TBC1D3HP0C7X1 549 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 STC1P52823 247 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 MAZP56270 477 aaKnown RBP13.02□□□□□ -0.33
SNED1-205ENST00000405547 ZNF155Q12901 538 aaPredicted RBP13.02□□□□□ -0.33
SNED1-205ENST00000405547 LSAMPQ13449 338 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 TLR1Q15399 786 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 TBC1D3GQ6DHY5 549 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 TBC1D3CQ6IPX1 549 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 NANOGP8Q6NSW7 305 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 TBC1D3Q8IZP1 549 aaPredicted RBP13.02□□□□□ -0.33
SNED1-205ENST00000405547 AQP11Q8NBQ7 271 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 FAM46DQ8NEK8 389 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 FBXO22Q8NEZ5 403 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 FNDC8Q8TC99 324 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 TMEM74Q96NL1 305 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 NANOGQ9H9S0 305 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 ADAMTS6Q9UKP5 1117 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 SCML2Q9UQR0 700 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 PHLPP1O60346 1717 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 SMPD1P17405 629 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 GRIA2P42262 883 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 DNASE1L3Q13609 305 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 ZNF181Q2M3W8 571 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 OR4F6Q8NGB9 312 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 RHEBL1Q8TAI7 183 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 ZSWIM3Q96MP5 696 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 IFT27Q9BW83 186 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 NEUROD4Q9HD90 331 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 FBXW2Q9UKT8 454 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 A0A0G2JLL6 359 aaPredicted RBP13.02□□□□□ -0.33
SNED1-205ENST00000405547 KRT33AO76009 404 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 EBLN1P0CF75 366 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 ZNF182P17025 639 aaPredicted RBP13.02□□□□□ -0.33
SNED1-205ENST00000405547 ACVR2AP27037 513 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 TXNL4AP83876 142 aaKnown RBP13.02□□□□□ -0.33
SNED1-205ENST00000405547 PRRT2Q7Z6L0 340 aaPredicted RBP13.02□□□□□ -0.33
SNED1-205ENST00000405547 DENND1AQ8TEH3 1009 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 HTATIP2Q9BUP3 242 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 C14orf105Q9NVL8 296 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 MLXQ9UH92 298 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 CNOT11Q9UKZ1 510 aaKnown RBP13.02□□□□□ -0.33
SNED1-205ENST00000405547 ITGB1P05556 798 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 MEP1AQ16819 746 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 XKR4Q5GH76 650 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 RGMAQ96B86 450 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 MALT1Q9UDY8 824 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 HAS3O00219 553 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 SELPP16109 830 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 LAG3P18627 525 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 AMZ2Q86W34 360 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 TXLNGYQ9BZA5 131 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 LIN28AQ9H9Z2 209 aaKnown RBP13.01□□□□□ -0.33
SNED1-205ENST00000405547 MOCS1Q9NZB8 636 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 HEBP2Q9Y5Z4 205 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 FKBP7Q9Y680 259 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 SLITRK5O94991 958 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 CCL23P55773 120 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 EIF5AP63241 154 aaKnown RBP13.01□□□□□ -0.33
SNED1-205ENST00000405547 RABL3Q5HYI8 236 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 CADM2Q8N3J6 435 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 TMIEQ8NEW7 156 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 IFT46Q9NQC8 304 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 PCDHGB6Q9Y5F9 930 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 ANKRD36CQ5JPF3 1778 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 HPRP00739 348 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 STOMP27105 288 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 ZNF234Q14588 700 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 TSTQ16762 297 aaKnown RBP13.01□□□□□ -0.33
SNED1-205ENST00000405547 CHCHD4Q8N4Q1 142 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 CHST4Q8NCG5 386 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 ZNF382Q96SR6 550 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 LGR4Q9BXB1 951 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 VRTNQ9H8Y1 702 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 MEAF6Q9HAF1 191 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 RC3H2Q9HBD1 1191 aaKnown RBP13.01□□□□□ -0.33
SNED1-205ENST00000405547 RBM7Q9Y580 266 aaKnown RBP13.01□□□□□ -0.33
SNED1-205ENST00000405547 XKRXQ6PP77 449 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 SPAG16Q8N0X2 631 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 ZMIZ2Q8NF64 920 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 ZSCAN5AQ9BUG6 496 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 C12orf4Q9NQ89 552 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 TNFRSF10DQ9UBN6 386 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 ERVW-1Q9UQF0 538 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 MATN4O95460 622 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 NFATC1O95644 943 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 NOL9Q5SY16 702 aaKnown RBP13.01□□□□□ -0.33
SNED1-205ENST00000405547 C6orf183Q5T699 404 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 GOLGA7Q7Z5G4 137 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 GALNT12Q8IXK2 581 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 RAB11FIP5Q9BXF6 653 aa13.01□□□□□ -0.33
SNED1-205ENST00000405547 KCNE1P15382 129 aa13□□□□□ -0.33
SNED1-205ENST00000405547 TGFBIQ15582 683 aa13□□□□□ -0.33
SNED1-205ENST00000405547 FBXL22Q6P050 247 aa13□□□□□ -0.33
SNED1-205ENST00000405547 SYCE2Q6PIF2 218 aa13□□□□□ -0.33
SNED1-205ENST00000405547 DPAGT1Q9H3H5 408 aa13□□□□□ -0.33
SNED1-205ENST00000405547 SLC22A14Q9Y267 594 aa13□□□□□ -0.33
SNED1-205ENST00000405547 KIF13AQ9H1H9 1805 aa13□□□□□ -0.33
SNED1-205ENST00000405547 RAB36O95755 333 aa13□□□□□ -0.33
SNED1-205ENST00000405547 PKP4Q99569 1192 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms