RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 GLRA4Q5JXX5 417 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 STPG1Q5TH74 334 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 LYSMD4Q5XG99 296 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 WBP2NLQ6ICG8 309 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 ZNF449Q6P9G9 518 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 CTR9Q6PD62 1173 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 C11orf88Q6PI97 169 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 KCTD9Q7L273 389 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 TRPT1Q86TN4 253 aaKnown RBP3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 NR2C2APQ86WQ0 139 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 SFRP1Q8N474 314 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 RFLNBQ8N5W9 214 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 CCDC63Q8NA47 563 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 MSANTD4Q8NCY6 345 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 OR7G3Q8NG95 312 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 P2RX5Q93086 422 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 TEKT1Q969V4 418 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 TSACCQ96A04 125 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 KLHL5Q96PQ7 755 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 SIX2Q9NPC8 291 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 FGF21Q9NSA1 209 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 IARS2Q9NSE4 1012 aaKnown RBP3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 INTS9Q9NV88 658 aaKnown RBP3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 PKD2L2Q9NZM6 624 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 MTRRQ9UBK8 725 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 PROCRQ9UNN8 238 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 RUVBL2Q9Y230 463 aaKnown RBP3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 A0A1W2PN81 502 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 A0A1W2PRV1 198 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 H3BMM5 538 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 FGF17O60258 216 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 SLC22A3O75751 556 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 SLC16A8O95907 504 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 CD48P09326 243 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 F3P13726 295 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 EPORP19235 508 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 CHRNA7P36544 502 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 MAGEB1P43366 347 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 OR3A1P47881 315 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 ST8SIA6P61647 398 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 AP1B1Q10567 949 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 TRAP1Q12931 704 aaKnown RBP3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 P2RY6Q15077 328 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 EXT1Q16394 746 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 ARHGEF16Q5VV41 709 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 OR4C11Q6IEV9 310 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 NOTUMQ6P988 496 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 C19orf48Q6RUI8 117 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 SLC16A9Q7RTY1 509 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 AMIGO1Q86WK6 493 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 CCDC83Q8IWF9 413 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 C9orf106Q8NAJ2 232 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 NOA1Q8NC60 698 aaKnown RBP3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 TM9SF4Q92544 642 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 WBP2Q969T9 261 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 CABS1Q96KC9 395 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 GDAP1L1Q96MZ0 367 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 NODALQ96S42 347 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 PI4K2AQ9BTU6 479 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 CDK19Q9BWU1 502 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 SLC5A7Q9GZV3 580 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 SRD5A3Q9H8P0 318 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 SDF2L1Q9HCN8 221 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 LIPT1Q9Y234 373 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 CHKBQ9Y259 395 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 PPP2R2CQ9Y2T4 447 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 PCDHGA1Q9Y5H4 931 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 KLK4Q9Y5K2 254 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 KIAA1210Q9ULL0 1709 aa3.52□□□□□ -1.85
HMGB1P17-201ENST00000403495 IFITM10A6NMD0 228 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 SNURFLB1AK76 121 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 KBTBD13C9JR72 458 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 E5RGE8 158 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 SLC33A1O00400 549 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 TTI1O43156 1089 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 KINO60870 393 aaKnown RBP3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 TRMUO75648 421 aaKnown RBP3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 GH1P01241 217 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 SP9P0CG40 484 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 TGFB3P10600 412 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 ATP6V1B1P15313 513 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 MAP2K2P36507 400 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 HNF4AP41235 474 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 CDX1P47902 265 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 NPBWR1P48145 328 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 MAZP56270 477 aaKnown RBP3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 ASIC1P78348 528 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 RPL36AP83881 106 aaKnown RBP3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 SP3Q02447 781 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 KLC1Q07866 573 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 ACTN3Q08043 901 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 RBM39Q14498 530 aaKnown RBP3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 LASP1Q14847 261 aaKnown RBP3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 RBBP7Q16576 425 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 SLC35D3Q5M8T2 416 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 TTC27Q6P3X3 843 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 SH2D5Q6ZV89 423 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 MARK2Q7KZI7 788 aaKnown RBP3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 C5orf24Q7Z6I8 188 aa3.51□□□□□ -1.85
HMGB1P17-201ENST00000403495 PIGZQ86VD9 579 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms