RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 SPRTNQ9H040 489 aaPredicted RBP16.5■□□□□ 0.23
PTCHD3P3-201ENST00000403073 TMEM216Q9P0N5 145 aa16.5■□□□□ 0.23
PTCHD3P3-201ENST00000403073 CPSF2Q9P2I0 782 aaKnown RBP16.5■□□□□ 0.23
PTCHD3P3-201ENST00000403073 XPR1Q9UBH6 696 aa16.5■□□□□ 0.23
PTCHD3P3-201ENST00000403073 DKK4Q9UBT3 224 aa16.5■□□□□ 0.23
PTCHD3P3-201ENST00000403073 SNX7Q9UNH6 387 aa16.5■□□□□ 0.23
PTCHD3P3-201ENST00000403073 PLCL2Q9UPR0 1127 aa16.5■□□□□ 0.23
PTCHD3P3-201ENST00000403073 A0A0J9YVX5 310 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 CCDC189A1A4V9 331 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 OR2A25A4D2G3 310 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 TLX3O43711 291 aaPredicted RBP16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 TIAF1O95411 115 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 MSL3P1P0C860 447 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 CDH1P12830 882 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 ZNF28P17035 718 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 AGTR2P50052 363 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 ZNF844Q08AG5 666 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 PRAMEF17Q5VTA0 474 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 BPHLQ86WA6 291 aaPredicted RBP16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 C17orf64Q86WR6 236 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 PLD3Q8IV08 490 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 KLHDC8AQ8IYD2 350 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 CNPY4Q8N129 248 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 RIBC1Q8N443 379 aaPredicted RBP16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 TMEM151AQ8N4L1 468 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 MYRIPQ8NFW9 859 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 FGF11Q92914 225 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 ZIM3Q96PE6 472 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 TEFMQ96QE5 360 aaKnown RBP16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 ZPBPQ9BS86 351 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 B3GNT4Q9C0J1 378 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 FANCEQ9HB96 536 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 LGALS13Q9UHV8 139 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 SERTAD3Q9UJW9 196 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 PILRAQ9UKJ1 303 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 DYRK1BQ9Y463 629 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 ASB1Q9Y576 335 aa16.49■□□□□ 0.23
PTCHD3P3-201ENST00000403073 LOC105369274A0A096LPK9 316 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 LOC102723532A0A0G2JNH3 316 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 STK16O75716 305 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 SBK3P0C264 359 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 GFAPP14136 432 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 CSNK1G2P78368 415 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 COL9A2Q14055 689 aaPredicted RBP16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 NAA25Q14CX7 972 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 PFKFB4Q16877 469 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 ZC3H12BQ5HYM0 836 aaKnown RBP16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 CATSPEREQ5SY80 951 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 FRMPD2BQ6IN97 320 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 CYB5D1Q6P9G0 228 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 OR4N4Q8N0Y3 316 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 C4orf33Q8N1A6 199 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 HNRNPLLQ8WVV9 542 aaKnown RBP16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 NEIL2Q969S2 332 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 MRPL57Q9BQC6 102 aaKnown RBP16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 CD244Q9BZW8 370 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 SPRY4Q9C004 299 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 SYNPO2LQ9H987 977 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 CNOT10Q9H9A5 744 aaKnown RBP16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 STARD5Q9NSY2 213 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 TMEM184CQ9NVA4 438 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 ANKMY1Q9P2S6 941 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 DCDC2Q9UHG0 476 aa16.48■□□□□ 0.23
PTCHD3P3-201ENST00000403073 LRRC14BA6NHZ5 514 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 TK2O00142 265 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 TAF4O00268 1085 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 HAT1O14929 419 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 KLK8O60259 260 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 CCNT2O60583 730 aaKnown RBP16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 SCRG1O75711 98 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 OR2B3O76000 313 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 STK17BO94768 372 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 IPO13O94829 963 aaKnown RBP16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 KIAA0754O94854 1291 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 NTRK1P04629 796 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 KRT4P19013 534 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 HRH2P25021 359 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 ITGA1P56199 1179 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 MEF2AQ02078 507 aaPredicted RBP16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 KRT71Q3SY84 523 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 CEP85LQ5SZL2 805 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 TMEM126BQ8IUX1 230 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 SNX31Q8N9S9 440 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 OR8K5Q8NH50 307 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 SLC5A11Q8WWX8 675 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 ZCCHC14Q8WYQ9 949 aaKnown RBP16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 NAF1Q96HR8 494 aaKnown RBP16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 ZFYVE21Q9BQ24 234 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 SELENOSQ9BQE4 189 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 ULBP3Q9BZM4 244 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 MRPL46Q9H2W6 279 aaKnown RBP16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 DNAJC11Q9NVH1 559 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 IRAK4Q9NWZ3 460 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 KCNE2Q9Y6J6 123 aa16.47■□□□□ 0.23
PTCHD3P3-201ENST00000403073 TEX51A0A1B0GUA7 166 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 E7EQ34 232 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 H3BMH7 237 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 GSTA1P08263 222 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 CCR8P51685 355 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms