RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 STX1BP61266 288 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 DYNC1I2Q13409 638 aaKnown RBP6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 ZNF235Q14590 738 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 ZXDCQ2QGD7 858 aaPredicted RBP6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 TMEM240Q5SV17 173 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 SPRED1Q7Z699 444 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 CARM1Q86X55 608 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 HERC6Q8IVU3 1022 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 C1orf210Q8IVY1 113 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 LGI2Q8N0V4 545 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 RYBPQ8N488 228 aaPredicted RBP6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 MINDY1Q8N5J2 469 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 PCSK9Q8NBP7 692 aaKnown RBP6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 TWIST2Q8WVJ9 160 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 EXT2Q93063 718 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 DGCR14Q96DF8 476 aaKnown RBP6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 CNBD2Q96M20 576 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 SLC29A1Q99808 456 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 HOPXQ9BPY8 73 aaPredicted RBP6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.62□□□□□ -1.357e-7■□□□□ 10.9
CSNK2A1-204ENST00000400227 RBM38Q9H0Z9 239 aaKnown RBP6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 MAGEH1Q9H213 219 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 RETREG1Q9H6L5 497 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 MID1IP1Q9NPA3 183 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 ARMC1Q9NVT9 282 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 MARCH5Q9NX47 278 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 CMTM6Q9NX76 183 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 GIMAP2Q9UG22 337 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 PTGDR2Q9Y5Y4 395 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 ACTL7AQ9Y615 435 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 SCN8AQ9UQD0 1980 aa6.62□□□□□ -1.35
CSNK2A1-204ENST00000400227 A0A1B0GTW7 788 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 AQP12BA6NM10 295 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 SLC38A8A6NNN8 435 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 NR5A2O00482 541 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 STX16O14662 325 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 HTRA2O43464 458 aaPredicted RBP6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 CA12O43570 354 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 KDELR3O43731 214 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 ACSL4O60488 711 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 VPS4BO75351 444 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 ECI2O75521 394 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 RHOBTB1O94844 696 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 CLPTM1O96005 669 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 SERPINF2P08697 491 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 PIRTP0C851 137 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 HSD17B1P14061 328 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 ETS2P15036 469 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 LBPP18428 481 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 CD9P21926 228 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 CALRP27797 417 aaKnown RBP6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 EEF1DP29692 281 aaKnown RBP6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 FMO4P31512 558 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 RGRP47804 291 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 ZFP36L2P47974 494 aaKnown RBP6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 NME5P56597 212 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 ATP6V0D1P61421 351 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 GNA12Q03113 381 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 PRKCZQ05513 592 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 FOXM1Q08050 763 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 LCP2Q13094 533 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 GPR17Q13304 367 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 MTA1Q13330 715 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 RBBP5Q15291 538 aaKnown RBP6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 CYTH1Q15438 398 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 TAF1AQ15573 450 aaPredicted RBP6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 CSRP2Q16527 193 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 PFKFB4Q16877 469 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 SLC5A9Q2M3M2 681 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 MYLK3Q32MK0 819 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 NRN1LQ496H8 165 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 NADK2Q4G0N4 442 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 MTX3Q5HYI7 312 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 COQ5Q5HYK3 327 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 CROCCQ5TZA2 2017 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 FAM171A1Q5VUB5 890 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 PPP4R4Q6NUP7 873 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 IYDQ6PHW0 289 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 AFTPHQ6ULP2 937 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 RBM44Q6ZP01 1051 aaKnown RBP6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 SPATA19Q7Z5L4 167 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 AMIGO2Q86SJ2 522 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 DHFR2Q86XF0 187 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 AQP12AQ8IXF9 295 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 SLC15A3Q8IY34 581 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 CMTR2Q8IYT2 770 aaKnown RBP6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 CFAP52Q8N1V2 620 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 MIER2Q8N344 545 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 PCYOX1LQ8NBM8 494 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 OR2T34Q8NGX1 318 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 OR2T3Q8NH03 318 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 FAM110BQ8TC76 370 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 TRPC4APQ8TEL6 797 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 DDI1Q8WTU0 396 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.61□□□□□ -1.357e-6■■■■■ 27.5
CSNK2A1-204ENST00000400227 EME1Q96AY2 570 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 B3GALT6Q96L58 329 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 FAM193BQ96PV7 902 aaPredicted RBP6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 KCNA7Q96RP8 456 aa6.61□□□□□ -1.35
CSNK2A1-204ENST00000400227 SLC39A3Q9BRY0 314 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms