RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 RASGEF1BQ0VAM2 473 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 C1orf52Q8N6N3 182 aaKnown RBP13.43□□□□□ -0.26
VAPA-202ENST00000400000 HNRNPABQ99729 332 aaKnown RBP13.43□□□□□ -0.26
VAPA-202ENST00000400000 OR51B5Q9H339 312 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 RBPJLQ9UBG7 517 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 SALL3Q9BXA9 1300 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 A0A1W2PPK0 400 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 L7N2F9 121 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 AURKAO14965 403 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 MTTPP55157 894 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 VAMP2P63027 116 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 ARL9Q6T311 187 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 INPP4AQ96PE3 977 aaPredicted RBP13.43□□□□□ -0.26
VAPA-202ENST00000400000 KCNA7Q96RP8 456 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 DTLQ9NZJ0 730 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 A0A1W2PQ45 241 aaPredicted RBP13.42□□□□□ -0.26
VAPA-202ENST00000400000 A0A1W2PQY0 241 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 A6NCN8 305 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 FHP07954 510 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 GNAZP19086 355 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 AQP4P55087 323 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 CLEC20AQ6ZU45 233 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 ZNF761Q86XN6 746 aaPredicted RBP13.42□□□□□ -0.26
VAPA-202ENST00000400000 SERINC1Q9NRX5 453 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 HPF1Q9NWY4 346 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 POU2F3Q9UKI9 436 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 FABP12A6NFH5 140 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 PRAMEF12O95522 483 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 CHRNA1P02708 482 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 RBM48Q5RL73 367 aaKnown RBP13.42□□□□□ -0.26
VAPA-202ENST00000400000 HOMEZQ8IX15 550 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 AJAP1Q9UKB5 411 aaPredicted RBP13.42□□□□□ -0.26
VAPA-202ENST00000400000 IRGMA1A4Y4 181 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 EOMESO95936 686 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 LHCGRP22888 699 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 KCNC4Q03721 635 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 TMED4Q7Z7H5 227 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 BADQ92934 168 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 MMABQ96EY8 250 aaPredicted RBP13.42□□□□□ -0.26
VAPA-202ENST00000400000 ADAMTS3O15072 1205 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 VNN1O95497 513 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 RBM39Q14498 530 aaKnown RBP13.42□□□□□ -0.26
VAPA-202ENST00000400000 LRRC66Q68CR7 880 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 ZNF548Q8NEK5 533 aaPredicted RBP13.42□□□□□ -0.26
VAPA-202ENST00000400000 NSMCE3Q96MG7 304 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 OR8D2Q9GZM6 311 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 WASH3PC4AMC7 463 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 HAS3O00219 553 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 ECI2O75521 394 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 ZNF3P17036 446 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 RPS13P62277 151 aaKnown RBP13.42□□□□□ -0.26
VAPA-202ENST00000400000 IL22RA1Q8N6P7 574 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 IRGQQ8WZA9 623 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 SMPD3Q9NY59 655 aaPredicted RBP13.42□□□□□ -0.26
VAPA-202ENST00000400000 ZNF221Q9UK13 617 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 C2CD4BA6NLJ0 364 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 CSTBP04080 98 aaKnown RBP13.42□□□□□ -0.26
VAPA-202ENST00000400000 VSX2P58304 361 aaPredicted RBP13.42□□□□□ -0.26
VAPA-202ENST00000400000 ADAM17P78536 824 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 QSOX2Q6ZRP7 698 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 RAB43Q86YS6 212 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 RFKQ969G6 155 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 TMEM51Q9NW97 253 aa13.42□□□□□ -0.26
VAPA-202ENST00000400000 PITPNM1O00562 1244 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 POP7O75817 140 aaKnown RBP13.41□□□□□ -0.26
VAPA-202ENST00000400000 KLK3P07288 261 aaPredicted RBP13.41□□□□□ -0.26
VAPA-202ENST00000400000 GRPRP30550 384 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 L1CAMP32004 1257 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 DPYSQ14117 519 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 SLC2A7Q6PXP3 512 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 CERS6Q6ZMG9 384 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 ZNF527Q8NB42 609 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 OR52E4Q8NGH9 312 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 FBXL18Q96ME1 805 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 AP1S1P61966 158 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 KCTD9Q7L273 389 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 TPSD1Q9BZJ3 242 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 CCNB1IP1Q9NPC3 277 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 GSKIPQ9P0R6 139 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 APOL3O95236 402 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 C4orf32Q8N8J7 132 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 TESCQ96BS2 214 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 POLR2J2Q9GZM3 115 aaKnown RBP13.41□□□□□ -0.26
VAPA-202ENST00000400000 USP32Q8NFA0 1604 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 KCNJ13O60928 360 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 ATP1B2P14415 290 aaPredicted RBP13.41□□□□□ -0.26
VAPA-202ENST00000400000 PTGER3P43115 390 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 THOC6Q86W42 341 aaKnown RBP13.41□□□□□ -0.26
VAPA-202ENST00000400000 RGMAQ96B86 450 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 BORCS8Q96FH0 119 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 TGM7Q96PF1 710 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 GATA5Q9BWX5 397 aaPredicted RBP13.41□□□□□ -0.26
VAPA-202ENST00000400000 PNPLA8Q9NP80 782 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 EURLQ9NYK6 297 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 K7EPI3 171 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 TNFRSF8P28908 595 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 OR1E2P47887 323 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 CNKSR3Q6P9H4 555 aa13.41□□□□□ -0.26
VAPA-202ENST00000400000 NIFKQ9BYG3 293 aaKnown RBP13.41□□□□□ -0.26
VAPA-202ENST00000400000 GIMAP2Q9UG22 337 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms