RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 FAM53BQ14153 422 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 CSHL1Q14406 222 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 PAGE2BQ5JRK9 111 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 DCAF12Q5T6F0 453 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 UBAP2Q5T6F2 1119 aaKnown RBP7.23□□□□□ -1.25
USP16-204ENST00000399976 PRMT9Q6P2P2 845 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 FIGLAQ6QHK4 219 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 CAPN12Q6ZSI9 719 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 DTX1Q86Y01 620 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 SFTPA2Q8IWL1 248 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 SRRM1Q8IYB3 904 aaKnown RBP7.23□□□□□ -1.25
USP16-204ENST00000399976 GSPT2Q8IYD1 628 aaKnown RBP7.23□□□□□ -1.25
USP16-204ENST00000399976 OR6Y1Q8NGX8 325 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 SLC5A11Q8WWX8 675 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 NXNL1Q96CM4 212 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 ZFYVE21Q9BQ24 234 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 NLNQ9BYT8 704 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 SLC29A3Q9BZD2 475 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 CAB39LQ9H9S4 337 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 TRPS1Q9UHF7 1281 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 IKZF3Q9UKT9 509 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 DYRK1BQ9Y463 629 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 MDC1Q14676 2089 aaKnown RBP7.23□□□□□ -1.25
USP16-204ENST00000399976 IGHV5-51A0A0C4DH38 117 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 C21orf140B9A014 251 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 TERTO14746 1132 aaKnown RBP7.23□□□□□ -1.25
USP16-204ENST00000399976 SCELO95171 688 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 MLYCDO95822 493 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 ALBP02768 609 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 ENO1P06733 434 aaKnown RBP7.23□□□□□ -1.25
USP16-204ENST00000399976 DHRS4L1P0CG22 281 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 LIPCP11150 499 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 HOXB3P14651 431 aaPredicted RBP7.23□□□□□ -1.25
USP16-204ENST00000399976 POLR2CP19387 275 aaPredicted RBP7.23□□□□□ -1.25
USP16-204ENST00000399976 IMPDH1P20839 514 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 CDH3P22223 829 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 HK2P52789 917 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 PKNOX1P55347 436 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 ITGA1P56199 1179 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 HERVK_113P63132 956 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 ABHD18Q0P651 414 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 C16orf72Q14CZ0 275 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 PDK4Q16654 411 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 ADPRMQ3LIE5 342 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 GRHL2Q6ISB3 625 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 RHBDD2Q6NTF9 364 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 NXPE4Q6UWF7 544 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 CMC1Q7Z7K0 106 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 THOC6Q86W42 341 aaKnown RBP7.23□□□□□ -1.25
USP16-204ENST00000399976 AFAP1L2Q8N4X5 818 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 Q8N9G6 341 aaPredicted RBP7.23□□□□□ -1.25
USP16-204ENST00000399976 KCTD4Q8WVF5 259 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 MAP3K3Q99759 626 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 CCT7Q99832 543 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 NPLQ9BXD5 320 aaPredicted RBP7.23□□□□□ -1.25
USP16-204ENST00000399976 ERVK-6Q9BXR3 956 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 WDR54Q9H977 334 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 SLC6A20Q9NP91 592 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 HAO1Q9UJM8 370 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 RARRES3Q9UL19 164 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 PLLPQ9Y342 182 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 SLC22A7Q9Y694 548 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 PIEZO1Q92508 2521 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 FOXE1O00358 373 aaPredicted RBP7.22□□□□□ -1.25
USP16-204ENST00000399976 NPHS1O60500 1241 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 PLIN3O60664 434 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 CLEC3AO75596 197 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 WDR47O94967 919 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 SBK3P0C264 359 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 EBLN1P0CF75 366 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 C1GALT1C1LP0DN25 315 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 ACPPP15309 386 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 RBMS1P29558 406 aaKnown RBP7.22□□□□□ -1.25
USP16-204ENST00000399976 RORAP35398 523 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 GRK3P35626 688 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 GFERP55789 205 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 IRX1P78414 480 aaPredicted RBP7.22□□□□□ -1.25
USP16-204ENST00000399976 ZIC1Q15915 447 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 ZNF385CQ66K41 422 aaPredicted RBP7.22□□□□□ -1.25
USP16-204ENST00000399976 IRGCQ6NXR0 463 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 SLCO4C1Q6ZQN7 724 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 KRT78Q8N1N4 520 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 TTC29Q8NA56 475 aaPredicted RBP7.22□□□□□ -1.25
USP16-204ENST00000399976 TRPV3Q8NET8 790 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 ATXN7L3BQ96GX2 97 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 TGM7Q96PF1 710 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 OR2A5Q96R48 311 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 ZNF382Q96SR6 550 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 AIF1LQ9BQI0 150 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 ROGDIQ9GZN7 287 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 TMBIM4Q9HC24 238 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 SPHK1Q9NYA1 384 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 SERTAD3Q9UJW9 196 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 RUVBL2Q9Y230 463 aaKnown RBP7.22□□□□□ -1.25
USP16-204ENST00000399976 TDRKHQ9Y2W6 561 aaKnown RBP7.22□□□□□ -1.25
USP16-204ENST00000399976 IGLV3-12A0A075B6K2 115 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 IGKV1-8A0A0C4DH67 115 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 GSAPA4D1B5 854 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 ISM1B1AKI9 464 aa7.22□□□□□ -1.25
USP16-204ENST00000399976 E2F3O00716 465 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms