RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 EFCAB11Q9BUY7 163 aa12.84□□□□□ -0.35
ITSN1-208ENST00000399349 A0A0D9SEW6 157 aa12.83□□□□□ -0.35
ITSN1-208ENST00000399349 MMP20O60882 483 aa12.83□□□□□ -0.35
ITSN1-208ENST00000399349 CCR8P51685 355 aa12.83□□□□□ -0.35
ITSN1-208ENST00000399349 PUM1Q14671 1186 aaKnown RBP eCLIP12.83□□□□□ -0.35
ITSN1-208ENST00000399349 LRRC66Q68CR7 880 aa12.83□□□□□ -0.35
ITSN1-208ENST00000399349 OR2T5Q6IEZ7 315 aa12.83□□□□□ -0.35
ITSN1-208ENST00000399349 MBOAT1Q6ZNC8 495 aa12.83□□□□□ -0.35
ITSN1-208ENST00000399349 GOLGA7Q7Z5G4 137 aa12.83□□□□□ -0.35
ITSN1-208ENST00000399349 OR2T29Q8NH02 315 aa12.83□□□□□ -0.35
ITSN1-208ENST00000399349 SLC22A17Q8WUG5 538 aa12.83□□□□□ -0.35
ITSN1-208ENST00000399349 MCCC1Q96RQ3 725 aaPredicted RBP12.83□□□□□ -0.35
ITSN1-208ENST00000399349 BARD1Q99728 777 aaKnown RBP12.83□□□□□ -0.35
ITSN1-208ENST00000399349 CCDC59Q9P031 241 aaKnown RBP12.83□□□□□ -0.35
ITSN1-208ENST00000399349 RHCGQ9UBD6 479 aa12.83□□□□□ -0.35
ITSN1-208ENST00000399349 COPS7AQ9UBW8 275 aa12.83□□□□□ -0.35
ITSN1-208ENST00000399349 KCNK6Q9Y257 313 aa12.83□□□□□ -0.35
ITSN1-208ENST00000399349 RPL36Q9Y3U8 105 aaKnown RBP12.83□□□□□ -0.35
ITSN1-208ENST00000399349 PREPP48147 710 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 AGTR2P50052 363 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 ARHGDIBP52566 201 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 DIO3P55073 304 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 TSC22D1Q15714 1073 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 PPP1R3AQ16821 1122 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 TNFAIP8L3Q5GJ75 292 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 ARL9Q6T311 187 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 C2orf15Q8WU43 125 aaKnown RBP12.83□□□□□ -0.36
ITSN1-208ENST00000399349 KXD1Q9BQD3 176 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 PCBD2Q9H0N5 130 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 TAS2R7Q9NYW3 318 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 KNDC1Q76NI1 1749 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 PITPNM1O00562 1244 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 CPNE3O75131 537 aaKnown RBP12.83□□□□□ -0.36
ITSN1-208ENST00000399349 RPP14O95059 124 aaKnown RBP12.83□□□□□ -0.36
ITSN1-208ENST00000399349 CD2P06729 351 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 SP140Q13342 867 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 MS4A13Q5J8X5 152 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 SIAH1Q8IUQ4 282 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 OR5T3Q8NGG3 340 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 KCTD13Q8WZ19 329 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 COMMD4Q9H0A8 199 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 SPATA7Q9P0W8 599 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 PLAGL1Q9UM63 463 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 WDR37Q9Y2I8 494 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 SLC22A2O15244 555 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 RB1P06400 928 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 DNAJA1P31689 397 aaKnown RBP12.83□□□□□ -0.36
ITSN1-208ENST00000399349 GMPRP36959 345 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 RPS3AP61247 264 aaKnown RBP12.83□□□□□ -0.36
ITSN1-208ENST00000399349 MEF2AQ02078 507 aaPredicted RBP12.83□□□□□ -0.36
ITSN1-208ENST00000399349 CYP27C1Q4G0S4 372 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 ADNP2Q6IQ32 1131 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 EPGNQ6UW88 154 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 C14orf80Q86SX3 495 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 RBM12BQ8IXT5 1001 aaKnown RBP12.83□□□□□ -0.36
ITSN1-208ENST00000399349 SMG8Q8ND04 991 aaKnown RBP12.83□□□□□ -0.36
ITSN1-208ENST00000399349 NPY6RQ99463 290 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 DCSTAMPQ9H295 470 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 CENPMQ9NSP4 180 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 PFDN2Q9UHV9 154 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 SNED1Q8TER0 1413 aa12.83□□□□□ -0.36
ITSN1-208ENST00000399349 ATP1B2P14415 290 aaPredicted RBP12.82□□□□□ -0.36
ITSN1-208ENST00000399349 SYN1P17600 705 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 SLC18A2Q05940 514 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 PPIGQ13427 754 aaKnown RBP eCLIP12.82□□□□□ -0.361e-6■■■■□ 25.5
ITSN1-208ENST00000399349 CBFBQ13951 182 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 KLHL22Q53GT1 634 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 XKR5Q6UX68 686 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 CEACAM20Q6UY09 585 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 ARMC10Q8N2F6 343 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 ZNF676Q8N7Q3 588 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 NFKBIDQ8NI38 313 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 PPP1R14BQ96C90 147 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 ZNF514Q96K75 400 aaPredicted RBP12.82□□□□□ -0.36
ITSN1-208ENST00000399349 ZBTB26Q9HCK0 441 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 CRTAC1Q9NQ79 661 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 PNO1Q9NRX1 252 aaKnown RBP12.82□□□□□ -0.36
ITSN1-208ENST00000399349 RGS17Q9UGC6 210 aaPredicted RBP12.82□□□□□ -0.36
ITSN1-208ENST00000399349 IL36AQ9UHA7 158 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 ERVK-11Q9UQG0 969 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 TMEM98Q9Y2Y6 226 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 FKBP7Q9Y680 259 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 GLOD5A6NK44 160 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 B4DGG1 531 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 ACOX3O15254 700 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 CA12O43570 354 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 S100A6P06703 90 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 HLA-EP13747 358 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 MEP1AQ16819 746 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 SFT2D3Q587I9 215 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 ZCCHC12Q6PEW1 402 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 THOC6Q86W42 341 aaKnown RBP12.82□□□□□ -0.36
ITSN1-208ENST00000399349 CILP2Q8IUL8 1156 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 TFGQ92734 400 aaPredicted RBP12.82□□□□□ -0.36
ITSN1-208ENST00000399349 AURKBQ96GD4 344 aaPredicted RBP12.82□□□□□ -0.36
ITSN1-208ENST00000399349 ZNF599Q96NL3 588 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 HERC2P3Q9BVR0 1158 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 ZNF304Q9HCX3 659 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 CD320Q9NPF0 282 aa12.82□□□□□ -0.36
ITSN1-208ENST00000399349 ITM2CQ9NQX7 267 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms