RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 DTWD1Q8N5C7 304 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 NKAPQ8N5F7 415 aaKnown RBP13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ENDOVQ8N8Q3 282 aaKnown RBP13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 LRRN4CLQ8ND94 238 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SLC39A7Q92504 469 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PYCR2Q96C36 320 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 HIST1H2AHQ96KK5 128 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 GBP5Q96PP8 586 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 GPR22Q99680 433 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 HIST1H2AJQ99878 128 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 H2AFJQ9BTM1 129 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 NDC1Q9BTX1 674 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 NINJ2Q9NZG7 142 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 MTRF1LQ9UGC7 380 aaKnown RBP13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 FARSAQ9Y285 508 aaKnown RBP13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 BSNQ9UPA5 3926 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 H7BY64 318 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 WISP3O95389 354 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ITGB2P05107 769 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 HBQ1P09105 142 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PTPN4P29074 926 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 GCGRP47871 477 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 RPS15P62841 145 aaKnown RBP13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 GRTP1Q5TC63 336 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PRAMEF13Q5VWM6 474 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ZNF425Q6IV72 752 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ADCK2Q7Z695 626 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PAQR7Q86WK9 346 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ZNF285Q96NJ3 590 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PRAP1Q96NZ9 151 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 FMO2Q99518 471 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ZFYVE21Q9BQ24 234 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 GPR87Q9BY21 358 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 NLNQ9BYT8 704 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SEMA4CQ9C0C4 833 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CDC42EP4Q9H3Q1 356 aaKnown RBP13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 TXLNGQ9NUQ3 528 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SRPK3Q9UPE1 567 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 FER1L5A0AVI2 2057 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 HAT1O14929 419 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SRPX2O60687 465 aaPredicted RBP13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CCNDBP1O95273 360 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 MED26O95402 600 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ACSL3O95573 720 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 RHOXF2BP0C7M4 288 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 FAM87AP0C7U9 286 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 STMN1P16949 149 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 AGXTP21549 392 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SPRP35270 261 aaPredicted RBP13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 AP1S2P56377 157 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 FOXL2P58012 376 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ABATP80404 500 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 DCDP81605 110 aaKnown RBP13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 MC1RQ01726 317 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 IL10RAQ13651 578 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 TSNQ15631 228 aaKnown RBP13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 DEFB109BQ30KR1 87 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 TCTE1Q5JU00 501 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CMC1Q7Z7K0 106 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 TMEM151BQ8IW70 566 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 EXD3Q8N9H8 876 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 RHOXF2Q9BQY4 288 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ARHGAP9Q9BRR9 750 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SGPP1Q9BX95 441 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 TRIM54Q9BYV2 358 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 FAM129AQ9BZQ8 928 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 POPDC3Q9HBV1 291 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CUTCQ9NTM9 273 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 NDOR1Q9UHB4 597 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 NFU1Q9UMS0 254 aa13.48□□□□□ -0.25
HLA-DQB1-202ENST00000399079 HEATR5BQ9P2D3 2071 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CDC14CA4D256 554 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PABPN1LA6NDY0 278 aaKnown RBP13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 H0YGG7 62 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ENO2P09104 434 aaPredicted RBP13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CCDC166P0CW27 439 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 NPPBP16860 134 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ITGAXP20702 1163 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ARF3P61204 181 aaPredicted RBP13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 GRM7Q14831 915 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SLMAPQ14BN4 828 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 NAA25Q14CX7 972 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 NCF4Q15080 339 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ZKSCAN8Q15776 578 aaPredicted RBP13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CRTC2Q53ET0 693 aaPredicted RBP13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 MLIPQ5VWP3 458 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 BORAQ6PGQ7 559 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 RELL1Q8IUW5 271 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 METTL27Q8N6F8 245 aaPredicted RBP13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ANKRD7Q92527 254 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 TSPAN17Q96FV3 270 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 OR2A5Q96R48 311 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 OR4K3Q96R72 315 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 DPH2Q9BQC3 489 aaPredicted RBP13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SLC22A11Q9NSA0 550 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ANKMY1Q9P2S6 941 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CTNNAL1Q9UBT7 734 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 TCFL5Q9UL49 500 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SNX7Q9UNH6 387 aa13.47□□□□□ -0.25
HLA-DQB1-202ENST00000399079 A0A1B0GX78 115 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms