RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 SDC2P34741 201 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 IDH3AP50213 366 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 NFKB2Q00653 900 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 SLBPQ14493 270 aaKnown RBP eCLIP13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 CHRNA6Q15825 494 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 LYSMD3Q7Z3D4 306 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 CCM2Q9BSQ5 444 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 TRIM2Q9C040 744 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 PCDHGA11Q9Y5H2 935 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 STYXL1Q9Y6J8 313 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 GRXCR2A6NFK2 248 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 CXCR6O00574 342 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 LINGO3P0C6S8 592 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 CXCR1P25024 350 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 RAB2AP61019 212 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 SHHQ15465 462 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 SWI5Q1ZZU3 235 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 RALGPS1Q5JS13 557 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 C22orf39Q6P5X5 142 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 LENG8Q96PV6 779 aaPredicted RBP13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 DTLQ9NZJ0 730 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 SERTAD3Q9UJW9 196 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 TELO2Q9Y4R8 837 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 NIPSNAP2O75323 286 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 ANGPTL1O95841 491 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 ACVR2AP27037 513 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 RPS14P62263 151 aaKnown RBP13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 SOX4Q06945 474 aaPredicted RBP13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 PRICKLE1Q96MT3 831 aaPredicted RBP13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 LMAN1LQ9HAT1 526 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 GPN1Q9HCN4 374 aaPredicted RBP13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 MOCS1Q9NZB8 636 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 VSTM5A8MXK1 200 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 UPK3BL1B0FP48 263 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 UPK3BL2E5RIL1 263 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 HLA-DQB2P05538 268 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 VIPR2P41587 438 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 TSPAN5P62079 268 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 HSF2Q03933 536 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 SLC10A7Q0GE19 358 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 ZBED6CLQ96FA7 236 aaPredicted RBP13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 MIPEPQ99797 713 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 GPATCH1Q9BRR8 931 aaKnown RBP13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 FANCFQ9NPI8 374 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 ANXA2P2A6NMY6 339 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 SLC30A4O14863 429 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 KAT7O95251 611 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 CLDN7O95471 211 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 ANXA2P07355 339 aaKnown RBP13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 DLDP09622 509 aaKnown RBP13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 PRAMEF14Q5SWL7 426 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 PRAMEF13Q5VWM6 474 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 CLNKQ7Z7G1 428 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 JPH3Q8WXH2 748 aaPredicted RBP13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 TWNKQ96RR1 684 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 ABCA3Q99758 1704 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 HCAR3P49019 387 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 CAND1Q86VP6 1230 aaKnown RBP13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 RASSF5Q8WWW0 418 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 RIT1Q92963 219 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 PAAF1Q9BRP4 392 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 DUSP26Q9BV47 211 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 RBCK1Q9BYM8 510 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 FBXO43Q4G163 708 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 CLEC12AQ5QGZ9 265 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 IL21RQ9HBE5 538 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 IFT80Q9P2H3 777 aaPredicted RBP13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 STOML2Q9UJZ1 356 aa13.88□□□□□ -0.19
PCDHA11-201ENST00000398640 ZNF217O75362 1048 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 AZGP1P25311 298 aaKnown RBP13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 PSMA1P25786 263 aaKnown RBP13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 GKP32189 559 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 MPIP34949 423 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 SLC9B1Q4ZJI4 515 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 ZNF311Q5JNZ3 666 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 CBR4Q8N4T8 237 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 ZSCAN5AQ9BUG6 496 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 PPM1HQ9ULR3 514 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 GRIP1Q9Y3R0 1128 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 FAM240BA0A1B0GVZ2 78 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 TRIM64A6NGJ6 449 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 J3KR12 359 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 NOVP48745 357 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 DHCR24Q15392 516 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 HFE2Q6ZVN8 426 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 USP30Q70CQ3 517 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 TMEM110Q86TL2 294 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 ZDHHC21Q8IVQ6 265 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 ZNF527Q8NB42 609 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 WDR60Q8WVS4 1066 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 NKD2Q969F2 451 aaPredicted RBP13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 ZNF514Q96K75 400 aaPredicted RBP13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 PHF12Q96QT6 1004 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 LDOC1O95751 146 aaPredicted RBP13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 GMFBP60983 142 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 IFI44LQ53G44 452 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 PGAM4Q8N0Y7 254 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 HPS1Q92902 700 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 RFKQ969G6 155 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 FEM1AQ9BSK4 669 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms