RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TMEM26Q6ZUK4 368 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CDC26Q8NHZ8 85 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 IRF7Q92985 503 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 MTERF1Q99551 399 aaKnown RBP17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 RIOK2Q9BVS4 552 aaKnown RBP17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 FAM118AQ9NWS6 357 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 MAN2B2Q9Y2E5 1009 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 PCDHGA8Q9Y5G5 932 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 HCFC2Q9Y5Z7 792 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 FADS2P1A8MWK0 482 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 FAM220BPB1ANY3 271 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ARHGEF15O94989 841 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ATE1O95260 518 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 MAPK10P53779 464 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 PPP2R2BQ00005 443 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ZNF366Q8N895 744 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 OR7A2PQ8NGA2 310 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 MBOAT4Q96T53 435 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 LTBP2Q14767 1821 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 A0A1W2PQ67 120 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 HIDE1A8MVS5 230 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 PER2O15055 1255 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ADH1AP07327 375 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 RETP07949 1114 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 HOXB9P17482 250 aaPredicted RBP17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 IRF8Q02556 426 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CCSMST1Q4G0I0 132 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 NIPAL1Q6NVV3 410 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 PCDH12Q9NPG4 1184 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 SOBPA7XYQ1 873 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 HS6ST1O60243 411 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 EFNA1P20827 205 aaPredicted RBP17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 RCVRNP35243 200 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CREMQ03060 361 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ADNP2Q6IQ32 1131 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 TTC23LQ6PF05 361 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 THAP5Q7Z6K1 395 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 GALNT10Q86SR1 603 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 FRS2Q8WU20 508 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ASZ1Q8WWH4 475 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 TESCQ96BS2 214 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 REXO4Q9GZR2 422 aaKnown RBP17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 TMA7Q9Y2S6 64 aaKnown RBP17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 H3BMQ9 156 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 DCTP40126 519 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 PREPP48147 710 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 TPD52P55327 224 aaPredicted RBP17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ERVFC1P60507 584 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 KCNAB2Q13303 367 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ZNF829Q3KNS6 432 aaPredicted RBP17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 XKR6Q5GH73 641 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 EGFLAMQ63HQ2 1017 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ANKRD26P1Q6NSI1 321 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 SYT12Q8IV01 421 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 C8orf59Q8N0T1 100 aaPredicted RBP17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 MED8Q96G25 268 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 COG8Q96MW5 612 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 SPHK2Q9NRA0 654 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 TDP1Q9NUW8 608 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 THG1LQ9NWX6 298 aaKnown RBP17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ERVK-11Q9UQG0 969 aa17.78■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ARHGEF33A8MVX0 844 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CFAP99D6REC4 459 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 E7EQ34 232 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 HPRP00739 348 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CTSLP07711 333 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 JUPP14923 745 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 PFKLP17858 780 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 PRPH2P23942 346 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 VIPR1P32241 457 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 KIR3DL1P43629 444 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CTSCP53634 463 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 AP1S2P56377 157 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 SP140Q13342 867 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 LAPTM4AQ15012 233 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 MEP1AQ16819 746 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 BRAT1Q6PJG6 821 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 R3HCC1LQ7Z5L2 792 aaKnown RBP17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 OR52E4Q8NGH9 312 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 TCF25Q9BQ70 676 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 YTHDF1Q9BYJ9 559 aaKnown RBP17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 WNT6Q9Y6F9 365 aa17.77■□□□□ 0.44
CHRFAM7A-202ENST00000397827 TSPAN6O43657 245 aa17.77■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZNF682O95780 498 aa17.77■□□□□ 0.43
CHRFAM7A-202ENST00000397827 MAPK1P28482 360 aa17.77■□□□□ 0.43
CHRFAM7A-202ENST00000397827 RBM23Q86U06 439 aaKnown RBP17.77■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ADHFE1Q8IWW8 467 aa17.77■□□□□ 0.43
CHRFAM7A-202ENST00000397827 EID3Q8N140 333 aa17.77■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PNPT1Q8TCS8 783 aaKnown RBP17.77■□□□□ 0.43
CHRFAM7A-202ENST00000397827 THAP11Q96EK4 314 aa17.77■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PYURFQ96I23 114 aa17.77■□□□□ 0.43
CHRFAM7A-202ENST00000397827 REXO5Q96IC2 774 aaKnown RBP17.77■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PANX1Q96RD7 426 aa17.77■□□□□ 0.43
CHRFAM7A-202ENST00000397827 FANCEQ9HB96 536 aa17.77■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PRM3Q9NNZ6 103 aa17.77■□□□□ 0.43
CHRFAM7A-202ENST00000397827 EXD2Q9NVH0 621 aa17.77■□□□□ 0.43
CHRFAM7A-202ENST00000397827 GIN1Q9NXP7 522 aa17.77■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SCHIP1Q9P0W5 487 aaPredicted RBP17.77■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ERVW-1Q9UQF0 538 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms