RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 TRIM48Q8IWZ4 208 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 LAS2Q8IYD9 372 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 C2orf73Q8N5S3 287 aaPredicted RBP18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 AVL9Q8NBF6 648 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 OR4K1Q8NGD4 311 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 TUBGCP3Q96CW5 907 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 ELOVL6Q9H5J4 265 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 FARSBQ9NSD9 589 aaKnown RBP18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 ARMCX1Q9P291 453 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 ZNF490Q9ULM2 529 aaPredicted RBP18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 PCDHB11Q9Y5F2 797 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 PCDHGA11Q9Y5H2 935 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 CSNK1G3Q9Y6M4 447 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 TRBV23OR9-2A0A075B6M9 112 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 FAM221BA6H8Z2 402 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 SLC28A1O00337 649 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 LSM1O15116 133 aaKnown RBP18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 UBDO15205 165 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 PDYNP01213 254 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 NCF2P19878 526 aaPredicted RBP18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 PSMB5P28074 263 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 PEBP1P30086 187 aaKnown RBP18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 FASLGP48023 281 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 MRPL19P49406 292 aaKnown RBP18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 ATP4BP51164 291 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 PRDX1Q06830 199 aaKnown RBP18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 UBAP2LQ14157 1087 aaKnown RBP18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 ZNF423Q2M1K9 1284 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 SPRED3Q2MJR0 410 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 PAGE2BQ5JRK9 111 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 C6orf136Q5SQH8 315 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 OGFOD3Q6PK18 319 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 SCIMPQ6UWF3 145 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 SLC9B2Q86UD5 537 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 ADGRF3Q8IZF5 1079 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 LMX1AQ8TE12 382 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 SH3KBP1Q96B97 665 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 PITHD1Q9GZP4 211 aaPredicted RBP18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 SLC12A4Q9UP95 1085 aa18.77■□□□□ 0.6
PDLIM2-205ENST00000397761 LAMA1P25391 3075 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 RGS14O43566 566 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 CHRM5P08912 532 aaPredicted RBP18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 ALDOCP09972 364 aaKnown RBP18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 T-ENOLP0DO92 83 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 CDH1P12830 882 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 HSD3B1P14060 373 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 HSD3B2P26439 372 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 DPP6P42658 865 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 YBX1P67809 324 aaKnown RBP18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 ABATP80404 500 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 CSTF3Q12996 717 aaKnown RBP18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 SPATA19Q7Z5L4 167 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 OR7G3Q8NG95 312 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 SELENOMQ8WWX9 145 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 REPS1Q96D71 796 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 HBEGFQ99075 208 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 ACPTQ9BZG2 426 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 SRMSQ9H3Y6 488 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 UCK1Q9HA47 277 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 SPHK1Q9NYA1 384 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 GIMAP2Q9UG22 337 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 PCDHGA2Q9Y5H1 932 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 SNX11Q9Y5W9 270 aa18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 COPG1Q9Y678 874 aaKnown RBP18.77■□□□□ 0.59
PDLIM2-205ENST00000397761 PIPSLA2A3N6 862 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 BTN3A3O00478 584 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 NOBOXO60393 691 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 ERVK-8P63133 956 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 KLF10Q13118 480 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 SLBPQ14493 270 aaKnown RBP eCLIP18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 KIR2DS3Q14952 304 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 ANGPT1Q15389 498 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 SHBQ15464 509 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 MED27Q6P2C8 311 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 TMEM26Q6ZUK4 368 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 CEP68Q76N32 757 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 OR4E2Q8NGC2 313 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 FLVCR1-AS1Q8TAF5 88 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 UBE2E3Q969T4 207 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 PPP3R2Q96LZ3 170 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 CATSPER2Q96P56 530 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 ACAT2Q9BWD1 397 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 SPNS1Q9H2V7 528 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 NT5DC2Q9H857 520 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 BRF2Q9HAW0 419 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 ARL8BQ9NVJ2 186 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 PPT2Q9UMR5 302 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 CAPN7Q9Y6W3 813 aa18.76■□□□□ 0.59
PDLIM2-205ENST00000397761 IGKV1-8A0A0C4DH67 115 aa18.75■□□□□ 0.59
PDLIM2-205ENST00000397761 B4DGG1 531 aa18.75■□□□□ 0.59
PDLIM2-205ENST00000397761 RSL1D1O76021 490 aaKnown RBP18.75■□□□□ 0.59
PDLIM2-205ENST00000397761 KIAA0754O94854 1291 aa18.75■□□□□ 0.59
PDLIM2-205ENST00000397761 CCR8P51685 355 aa18.75■□□□□ 0.59
PDLIM2-205ENST00000397761 NEK2P51955 445 aa18.75■□□□□ 0.59
PDLIM2-205ENST00000397761 REEP5Q00765 189 aa18.75■□□□□ 0.59
PDLIM2-205ENST00000397761 HHEXQ03014 270 aa18.75■□□□□ 0.59
PDLIM2-205ENST00000397761 EMX2Q04743 252 aa18.75■□□□□ 0.59
PDLIM2-205ENST00000397761 SIM2Q14190 667 aaPredicted RBP18.75■□□□□ 0.59
PDLIM2-205ENST00000397761 SQLEQ14534 574 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms