RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ASNA1O43681 348 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 MED26O95402 600 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 RAF1P04049 648 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 GYPCP04921 128 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 PRSS56P0CW18 603 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 ICAM2P13598 275 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 CD9P21926 228 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 CXCR2P25025 360 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 RBL1P28749 1068 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 GRIA3P42263 894 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 EMP2P54851 167 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 BRD3Q15059 726 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 DNAJC21Q5F1R6 531 aaKnown RBP8.94□□□□□ -0.98
NEDD9-203ENST00000397378 WASHC2DQ5SRD0 308 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 ABHD17BQ5VST6 288 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 PAMR1Q6UXH9 720 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 NAPRTQ6XQN6 538 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 CHSY3Q70JA7 882 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 LAPTM4BQ86VI4 370 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 CDC20BQ86Y33 519 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 KLHDC8BQ8IXV7 354 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 PRSS58Q8IYP2 241 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 GHDCQ8N2G8 530 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 DTWD1Q8N5C7 304 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 OR2L8Q8NGY9 312 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 LILRB4Q8NHJ6 448 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 CDKN2AIPNLQ96HQ2 116 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 PPP1R2P1Q96PQ5 205 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 RNF6Q9Y252 685 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 PRSS21Q9Y6M0 314 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 FAM169AQ9Y6X4 670 aa8.94□□□□□ -0.98
NEDD9-203ENST00000397378 HAX1O00165 279 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 PSTPIP1O43586 416 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 CTSVO60911 334 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 RPN2P04844 631 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 ITGAMP11215 1152 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 TNNT1P13805 278 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 COMTP21964 271 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 FBLP22087 321 aaKnown RBP8.93□□□□□ -0.98
NEDD9-203ENST00000397378 PSMA3P25788 255 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 PSMB4P28070 264 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 EMP3P54852 163 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 VSX2P58304 361 aaPredicted RBP8.93□□□□□ -0.98
NEDD9-203ENST00000397378 GRB7Q14451 532 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 PRPSAP1Q14558 356 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 IQCB1Q15051 598 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 SF1Q15637 639 aaKnown RBP8.93□□□□□ -0.98
NEDD9-203ENST00000397378 MUM1Q2TAK8 710 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 SYTL3Q4VX76 610 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 ANKRD20A2Q5SQ80 823 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 ANKRD20A1Q5TYW2 823 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 ANKRD20A3Q5VUR7 823 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 DCUN1D3Q8IWE4 304 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 SLC22A15Q8IZD6 547 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 LMNTD1Q8N9Z9 388 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 STYXQ8WUJ0 223 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 HDAC10Q969S8 669 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 MVB12AQ96EY5 273 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 TBL1YQ9BQ87 522 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 FERMT1Q9BQL6 677 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 RAB11FIP5Q9BXF6 653 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 ZNF700Q9H0M5 742 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 NEUROD4Q9HD90 331 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 KLHL1Q9NR64 748 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 RASSF1Q9NS23 344 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 C14orf105Q9NVL8 296 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 TEKT2Q9UIF3 430 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 HYOU1Q9Y4L1 999 aa8.93□□□□□ -0.98
NEDD9-203ENST00000397378 F8W8V4 182 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 H7C0C1 242 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 APOC4-APOC2K7ER74 178 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 RASGRF2O14827 1237 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 SMAD7O15105 426 aaKnown RBP8.92□□□□□ -0.98
NEDD9-203ENST00000397378 PRPF4O43172 522 aaKnown RBP eCLIP8.92□□□□□ -0.98
NEDD9-203ENST00000397378 SPOPO43791 374 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 KLK8O60259 260 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 GPC4O75487 556 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 APOC2P02655 101 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 TPOP07202 933 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 CELA2AP08217 269 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 OR56A5P0C7T3 313 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 EEF1DP29692 281 aaKnown RBP8.92□□□□□ -0.98
NEDD9-203ENST00000397378 ATP5OP48047 213 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 UBASH3AP57075 661 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 NKX6-1P78426 367 aaPredicted RBP8.92□□□□□ -0.98
NEDD9-203ENST00000397378 EEF1A2Q05639 463 aaKnown RBP8.92□□□□□ -0.98
NEDD9-203ENST00000397378 ZNF33BQ06732 778 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 TCEAL1Q15170 157 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 PRTGQ2VWP7 1150 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 FBXW10Q5XX13 1052 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 TMEM211Q6ICI0 200 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 FRMPD2BQ6IN97 320 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 TMEM205Q6UW68 189 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 UNC5DQ6UXZ4 953 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 C16orf47Q6ZP98 133 aaPredicted RBP8.92□□□□□ -0.98
NEDD9-203ENST00000397378 ARHGEF18Q6ZSZ5 1173 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 MICALCLQ6ZW33 695 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 BBS12Q6ZW61 710 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 NEK10Q6ZWH5 1172 aa8.92□□□□□ -0.98
NEDD9-203ENST00000397378 RNF44Q7L0R7 432 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms