RNA–Protein interactions for RNA: ENST00000397358.7

HMBOX1-203, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-203ENST00000397358 RPS6KA6Q9UK32 745 aa12.74□□□□□ -0.37
HMBOX1-203ENST00000397358 SAP18O00422 153 aaKnown RBP12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 RECQLP46063 649 aaPredicted RBP12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 OR1E2P47887 323 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 ADPRMQ3LIE5 342 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 C5orf22Q49AR2 442 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 NEK5Q6P3R8 708 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 TRIM46Q7Z4K8 759 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 ZSWIM9Q86XI8 627 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 DCAF4L2Q8NA75 395 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 FAR1Q8WVX9 515 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 P2RY13Q9BPV8 354 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 BRD9Q9H8M2 597 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 THUMPD1Q9NXG2 353 aaKnown RBP12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 TMEFF2Q9UIK5 374 aaPredicted RBP12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 MBD1Q9UIS9 605 aaPredicted RBP12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 FBXO10Q9UK96 956 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 GAPDHSO14556 408 aaPredicted RBP12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 PORP16435 677 aaPredicted RBP12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 DNAJA1P31689 397 aaKnown RBP12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 HPCAL1P37235 193 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 CLK3P49761 638 aaKnown RBP12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 SNRPD1P62314 119 aaKnown RBP12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 CLCA4Q14CN2 919 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 LYPLAL1Q5VWZ2 237 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 CCSAPQ6IQ19 270 aaPredicted RBP12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 MCFD2Q8NI22 146 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 AP3M1Q9Y2T2 418 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 FZD6O60353 706 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 DLGAP3O95886 979 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 LAMP1P11279 417 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 SOAT1P35610 550 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 PRIM2P49643 509 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 RPP38P78345 283 aaKnown RBP12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 LRRC74AQ0VAA2 488 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 VMACQ2NL98 169 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 GPR33Q49SQ1 333 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 SYTL1Q8IYJ3 562 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 MRPS31Q92665 395 aaKnown RBP12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 ATAD3AQ9NVI7 634 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 SLCO3A1Q9UIG8 710 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 PIKFYVEQ9Y2I7 2098 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 KRBA1A5PL33 1030 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 WNT9AO14904 365 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 DUOXA1Q1HG43 343 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 SVOPQ8N4V2 548 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 VPS37AQ8NEZ2 397 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 OR2AP1Q8NGE2 309 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 PROX1Q92786 737 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 SLC29A3Q9BZD2 475 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 TPT1P8Q9HAU6 139 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 SGK2Q9HBY8 427 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 FZD4Q9ULV1 537 aa12.73□□□□□ -0.37
HMBOX1-203ENST00000397358 SUV39H1O43463 412 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 RPS3P23396 243 aaKnown RBP eCLIP12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 RRM2P31350 389 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 MRPL19P49406 292 aaKnown RBP12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 NIPAL1Q6NVV3 410 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 SHQ1Q6PI26 577 aaKnown RBP12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 RBM12BQ8IXT5 1001 aaKnown RBP12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 WDR12Q9GZL7 423 aaKnown RBP12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 MRPL17Q9NRX2 175 aaKnown RBP12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 NEUROG3Q9Y4Z2 214 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 PCDHGA10Q9Y5H3 936 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 M0R129 80 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 ANXA4P09525 319 aaPredicted RBP12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 CCDC159P0C7I6 412 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 CD9P21926 228 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 CD97P48960 835 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 GABARAPL2P60520 117 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 CAP1Q01518 475 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 SP3Q02447 781 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 STARD3Q14849 445 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 LAIR2Q6ISS4 152 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 MACC1Q6ZN28 852 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 SLC16A12Q6ZSM3 486 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 FAM9CQ8IZT9 166 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 C2orf73Q8N5S3 287 aaPredicted RBP12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 C1orf52Q8N6N3 182 aaKnown RBP12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 OR4K1Q8NGD4 311 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 CHPT1Q8WUD6 406 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 CMTM7Q96FZ5 175 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 TRIT1Q9H3H1 467 aaKnown RBP12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 SUV39H2Q9H5I1 410 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 SERHLQ9NQF3 203 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 ITM2CQ9NQX7 267 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 TMEM45AQ9NWC5 275 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 EFCAB9A8MZ26 197 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 INPPL1O15357 1258 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 HOXA2O43364 376 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 INHBBP09529 407 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 ITIH1P19827 911 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 FPR1P21462 350 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 PREPP48147 710 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 CREMQ03060 361 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 CPTPQ5TA50 214 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 FAM180BQ6P0A1 224 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 Q6ZVU0 165 aa12.72□□□□□ -0.37
HMBOX1-203ENST00000397358 STX19Q8N4C7 294 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms