RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CMPK1P30085 196 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 STX2P32856 288 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 GRIA3P42263 894 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 DMTNQ08495 405 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 MGAT5Q09328 741 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 ERV3-1Q14264 604 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 DEFB110Q30KQ9 67 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 DEFB109BQ30KR1 87 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.99□□□□□ -0.17
SEC13-208ENST00000397109 RHBDD2Q6NTF9 364 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 CYHR1Q6ZMK1 362 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 MCATQ8IVS2 390 aaKnown RBP13.99□□□□□ -0.17
SEC13-208ENST00000397109 CPNE9Q8IYJ1 553 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 OR2L3Q8NG85 312 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 OR2A1Q8NGT9 310 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 PROKR1Q8TCW9 393 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 DLG3Q92796 817 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 NDC1Q9BTX1 674 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 NLNQ9BYT8 704 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 SEMA4CQ9C0C4 833 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 SPRTNQ9H040 489 aaPredicted RBP13.99□□□□□ -0.17
SEC13-208ENST00000397109 TUBD1Q9UJT1 453 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 A0A1W2PPV9 198 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 FAM159BA6NKW6 160 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 C9J4A7 227 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 CCNDBP1O95273 360 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 CD63P08962 238 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 RPA3P35244 121 aaPredicted RBP13.98□□□□□ -0.17
SEC13-208ENST00000397109 SLC18A1P54219 525 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 PNLIPRP1P54315 467 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 POLE2P56282 527 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 ILF2Q12905 390 aaKnown RBP13.98□□□□□ -0.17
SEC13-208ENST00000397109 TCTE1Q5JU00 501 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 FCRL6Q6DN72 434 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 EPS8L3Q8TE67 593 aaKnown RBP13.98□□□□□ -0.17
SEC13-208ENST00000397109 THAP4Q8WY91 577 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 PKP4Q99569 1192 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 NDNQ99608 321 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 MIPEPQ99797 713 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 ACSS3Q9H6R3 686 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 TXLNGQ9NUQ3 528 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 UTP6Q9NYH9 597 aaKnown RBP13.98□□□□□ -0.17
SEC13-208ENST00000397109 ZFATQ9P243 1243 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 ANKMY1Q9P2S6 941 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 KLHL20Q9Y2M5 609 aa13.98□□□□□ -0.17
SEC13-208ENST00000397109 TLN1Q9Y490 2541 aaKnown RBP13.97□□□□□ -0.17
SEC13-208ENST00000397109 EXOC1LA0A1B0GW35 172 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 CDC14CA4D256 554 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 KRT87PA6NCN2 255 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 HCRTR1O43613 425 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 SRPX2O60687 465 aaPredicted RBP13.97□□□□□ -0.17
SEC13-208ENST00000397109 C8GP07360 202 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 ARSFP54793 590 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 NAB1Q13506 487 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 FASTKQ14296 549 aaKnown RBP13.97□□□□□ -0.17
SEC13-208ENST00000397109 UGT8Q16880 541 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 PTCHD3Q3KNS1 767 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 YOD1Q5VVQ6 348 aaPredicted RBP13.97□□□□□ -0.17
SEC13-208ENST00000397109 FAM45BPQ6NSW5 357 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 UBE2R2Q712K3 238 aaPredicted RBP13.97□□□□□ -0.17
SEC13-208ENST00000397109 ZNF771Q7L3S4 317 aaPredicted RBP13.97□□□□□ -0.17
SEC13-208ENST00000397109 SLC26A11Q86WA9 606 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 MYO1HQ8N1T3 1032 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 ZNF655Q8N720 491 aaPredicted RBP13.97□□□□□ -0.17
SEC13-208ENST00000397109 FAM45AQ8TCE6 357 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 MCOLN3Q8TDD5 553 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 DHRS4Q9BTZ2 278 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 ENAMQ9NRM1 1142 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 NSMCE4AQ9NXX6 385 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 VWA7Q9Y334 891 aa13.97□□□□□ -0.17
SEC13-208ENST00000397109 SLC16A5O15375 505 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 SLC16A8O95907 504 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 PSMB5P28074 263 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 HPDP32754 393 aaPredicted RBP13.96□□□□□ -0.17
SEC13-208ENST00000397109 CDKN2DP55273 166 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 GNGT1P63211 74 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 DCDP81605 110 aaKnown RBP13.96□□□□□ -0.17
SEC13-208ENST00000397109 TIAL1Q01085 375 aaKnown RBP eCLIP13.96□□□□□ -0.17
SEC13-208ENST00000397109 KCNAB2Q13303 367 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 SP140Q13342 867 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 PDAP1Q13442 181 aaKnown RBP13.96□□□□□ -0.17
SEC13-208ENST00000397109 GRM7Q14831 915 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 RBM20Q5T481 1227 aaKnown RBP13.96□□□□□ -0.17
SEC13-208ENST00000397109 UBAP2Q5T6F2 1119 aaKnown RBP13.96□□□□□ -0.17
SEC13-208ENST00000397109 ATP1A1-AS1Q5TC04 95 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 ZNF385CQ66K41 422 aaPredicted RBP13.96□□□□□ -0.17
SEC13-208ENST00000397109 LCN10Q6JVE6 187 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 PAQR3Q6TCH7 311 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 FAM198BQ6UWH4 519 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 CAPN12Q6ZSI9 719 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 PIWIL4Q7Z3Z4 852 aaKnown RBP13.96□□□□□ -0.17
SEC13-208ENST00000397109 EXOC3L1Q86VI1 746 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 ENDOVQ8N8Q3 282 aaKnown RBP13.96□□□□□ -0.17
SEC13-208ENST00000397109 GPATCH11Q8N954 259 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 FBF1Q8TES7 1133 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 ZNF480Q8WV37 535 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 EEF1AKMT1Q8WVE0 214 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 CDKL2Q92772 493 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 ZNF285Q96NJ3 590 aa13.96□□□□□ -0.17
SEC13-208ENST00000397109 GBP5Q96PP8 586 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms