RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 A0A0U1RQF3 1178 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 H3BQ06 376 aaPredicted RBP23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 EPOP01588 193 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 DDOSTP39656 456 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 MAGEA11P43364 429 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 STARD3Q14849 445 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 TCAIMQ8N3R3 496 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 MED30Q96HR3 178 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 TBC1D24Q9ULP9 559 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 LYVE1Q9Y5Y7 322 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 LOC110117498-PIK3R3F6TDL0 507 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 IRF1P10914 325 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 DNAJA1P31689 397 aaKnown RBP23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 FAM189BP81408 668 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 ELP6Q0PNE2 266 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 GPR50Q13585 617 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 PTRHD1Q6GMV3 140 aaKnown RBP23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 CALHM3Q86XJ0 350 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 RASAL3Q86YV0 1011 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 DENND1CQ8IV53 801 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 RGL4Q8IZJ4 473 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 OR8H2Q8N162 312 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 SUN5Q8TC36 379 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 RASSF5Q8WWW0 418 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 PEX13Q92968 403 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 CHCHD6Q9BRQ6 235 aa23.31■■□□□ 1.32
CSNK1E-203ENST00000396832 CAPN5O15484 640 aaPredicted RBP23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 TAPBPO15533 448 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 TLL1O43897 1013 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 NBNO60934 754 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 IL6P05231 212 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 GZMMP51124 257 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 VTCN1Q7Z7D3 282 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 PIK3R3Q92569 461 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 TBC1D20Q96BZ9 403 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 PPP3R2Q96LZ3 170 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 IRF2BPLQ9H1B7 796 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 TRIM39Q9HCM9 518 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 HCSTQ9UBK5 93 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 PCDHB9Q9Y5E1 797 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 DRGXA6NNA5 263 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 CRYZL1O95825 349 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 OTCP00480 354 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 ABCB1P08183 1280 aaPredicted RBP23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 UGT2B15P54855 530 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 TBRG1Q3YBR2 411 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 CTXN3Q4LDR2 81 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 NEK5Q6P3R8 708 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 ZNF517Q6ZMY9 492 aaPredicted RBP23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 MRPL10Q7Z7H8 261 aaKnown RBP23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 SIX5Q8N196 739 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 IL1RAPQ9NPH3 570 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 DLGAP4Q9Y2H0 992 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 AP3M1Q9Y2T2 418 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 TRPM7Q96QT4 1865 aa23.3■■□□□ 1.32
CSNK1E-203ENST00000396832 ANKRD66B4E2M5 251 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 HOXB6P17509 224 aaKnown RBP23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 FPR1P21462 350 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 NPRL3Q12980 569 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 TBCEQ15813 527 aaPredicted RBP23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 CCDC190Q86UF4 302 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 RNF175Q8N4F7 328 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 CDC26Q8NHZ8 85 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 KCNJ9Q92806 393 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 NUDT4Q9NZJ9 180 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 CRNNQ9UBG3 495 aaPredicted RBP23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 CTDSP2O14595 271 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 HOXC8P31273 242 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 ETV6P41212 452 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 SLC19A1P41440 591 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 ATXN7L2Q5T6C5 722 aaPredicted RBP23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 FAM171A1Q5VUB5 890 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 PLPP6Q8IY26 295 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 ULK4Q96C45 1275 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 EID2BQ96D98 161 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 GRIP1Q9Y3R0 1128 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 CCL27Q9Y4X3 112 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 PRSS21Q9Y6M0 314 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 TRBV5-3A0A0A0MS03 114 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 LOC730098B7Z3J9 87 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 VIPP01282 170 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 P2RX3P56373 397 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 YBEYP58557 167 aaPredicted RBP23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 Q6ZPB1 254 aaPredicted RBP23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 HORMAD1Q86X24 394 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 ZNF675Q8TD23 568 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 EGLN2Q96KS0 407 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 PSKH2Q96QS6 385 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 KCNS3Q9BQ31 491 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 LATS2Q9NRM7 1088 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 SAMHD1Q9Y3Z3 626 aaKnown RBP23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 ZNF451Q9Y4E5 1061 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 PCDHB5Q9Y5E4 795 aa23.29■■□□□ 1.32
CSNK1E-203ENST00000396832 MKI67P46013 3256 aaKnown RBP23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 ULK1O75385 1050 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 TACR1P25103 407 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 ARHGEF7Q14155 803 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 CEP78Q5JTW2 689 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 FATE1Q969F0 183 aa23.28■■□□□ 1.32
CSNK1E-203ENST00000396832 CEP19Q96LK0 163 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms