RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 FPR1P21462 350 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 CXCR1P25024 350 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 EIF2B2P49770 351 aaKnown RBP15.23■□□□□ 0.03
GNE-202ENST00000396594 DGKEP52429 567 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 C15orf39Q6ZRI6 1047 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 PRR23CQ6ZRP0 262 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 SYVN1Q86TM6 617 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 TMEM17Q86X19 198 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 OR5P2Q8WZ92 322 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 DDX1Q92499 740 aaKnown RBP15.23■□□□□ 0.03
GNE-202ENST00000396594 KIAA1143Q96AT1 154 aaPredicted RBP15.23■□□□□ 0.03
GNE-202ENST00000396594 ASPNQ9BXN1 380 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 CCSER2Q9H7U1 834 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 ELL3Q9HB65 397 aaPredicted RBP15.23■□□□□ 0.03
GNE-202ENST00000396594 NLGN3Q9NZ94 848 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 C4BP0C0L5 1744 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 GRXCR2A6NFK2 248 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 M0QZQ0 153 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 CAPN5O15484 640 aaPredicted RBP15.23■□□□□ 0.03
GNE-202ENST00000396594 GRID2O43424 1007 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 DRD2P14416 443 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 ZNF12P17014 697 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 GDF10P55107 478 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 CAMK1Q14012 370 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 ELAVL3Q14576 367 aaKnown RBP15.23■□□□□ 0.03
GNE-202ENST00000396594 PLCZ1Q86YW0 608 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 PTGES2Q9H7Z7 377 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 TMEM138Q9NPI0 162 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 CD84Q9UIB8 345 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 NAV1Q8NEY1 1877 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 A0A0U1RQJ8 604 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 E7ESA3 106 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 SLC31A1O15431 190 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 ARL6IP5O75915 188 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 PGRP06401 933 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 UQCRC2P22695 453 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 IL1R2P27930 398 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 HSPB3Q12988 150 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 GAS6Q14393 721 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 TYSND1Q2T9J0 566 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 DDI2Q5TDH0 399 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 TMIGD1Q6UXZ0 262 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 RBM44Q6ZP01 1051 aaKnown RBP15.23■□□□□ 0.03
GNE-202ENST00000396594 SCLYQ96I15 445 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 HSD3B7Q9H2F3 369 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 EQTNQ9NQ60 294 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 PHF24Q9UPV7 400 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 RBM7Q9Y580 266 aaKnown RBP15.23■□□□□ 0.03
GNE-202ENST00000396594 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.23■□□□□ 0.03
GNE-202ENST00000396594 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.23■□□□□ 0.03
GNE-202ENST00000396594 ZNF726A6NNF4 738 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 H1F0P07305 194 aaKnown RBP15.23■□□□□ 0.03
GNE-202ENST00000396594 NRIP1P48552 1158 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 ENPP2Q13822 863 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 PLET1Q6UQ28 207 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 EPGNQ6UW88 154 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 LRRC58Q96CX6 371 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 SLC35A5Q9BS91 424 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 RC3H2Q9HBD1 1191 aaKnown RBP15.23■□□□□ 0.03
GNE-202ENST00000396594 EPHA6Q9UF33 1036 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 A0A0X1KG70 313 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 TP53I11O14683 189 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 HPRP00739 348 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 C9P02748 559 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 SEC13P55735 322 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 SF3B4Q15427 424 aaKnown RBP eCLIP15.23■□□□□ 0.03
GNE-202ENST00000396594 SLC36A4Q6YBV0 504 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 RINLQ6ZS11 566 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 PACS2Q86VP3 889 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 NRROSQ86YC3 692 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 CBARPQ8N350 705 aaPredicted RBP15.23■□□□□ 0.03
GNE-202ENST00000396594 CCDC107Q8WV48 283 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 MYOCQ99972 504 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 POLR2J3Q9H1A7 115 aaKnown RBP15.23■□□□□ 0.03
GNE-202ENST00000396594 TXNRD2Q9NNW7 524 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 PADI2Q9Y2J8 665 aa15.23■□□□□ 0.03
GNE-202ENST00000396594 TIAM2Q8IVF5 1701 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 BAZ2BQ9UIF8 2168 aaKnown RBP15.22■□□□□ 0.03
GNE-202ENST00000396594 RGPD8O14715 1765 aaPredicted RBP15.22■□□□□ 0.03
GNE-202ENST00000396594 PRSS51A0A1B0GVH4 220 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 METTL21EPA6NDL7 271 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 C5AR1P21730 350 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 RPS3P23396 243 aaKnown RBP eCLIP15.22■□□□□ 0.03
GNE-202ENST00000396594 CDH12P55289 794 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 KCNC4Q03721 635 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 FASTKD3Q14CZ7 662 aaKnown RBP15.22■□□□□ 0.03
GNE-202ENST00000396594 CLEC6AQ6EIG7 209 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 HPS6Q86YV9 775 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 SLITRK4Q8IW52 837 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 METTL25Q8N6Q8 603 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 PSMA8Q8TAA3 256 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 NEK7Q8TDX7 302 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 TM9SF3Q9HD45 589 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 TMEM9Q9P0T7 183 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 SALL4Q9UJQ4 1053 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 PPM1BO75688 479 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 FAM155BO75949 473 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 CSTF2P33240 577 aaKnown RBP eCLIP15.22■□□□□ 0.03
GNE-202ENST00000396594 NUMBP49757 651 aa15.22■□□□□ 0.03
GNE-202ENST00000396594 ZNF763Q0D2J5 394 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms