RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 CADM1Q9BY67 442 aaKnown RBP12.26□□□□□ -0.45
TRIM39-204ENST00000396548 PCDHGA11Q9Y5H2 935 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 THADAQ6YHU6 1953 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 PIPSLA2A3N6 862 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 MEI4A8MW99 385 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 TBX6O95947 436 aaPredicted RBP12.25□□□□□ -0.45
TRIM39-204ENST00000396548 CDH1P12830 882 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 NQO1P15559 274 aaKnown RBP12.25□□□□□ -0.45
TRIM39-204ENST00000396548 GK5Q6ZS86 529 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 SNX32Q86XE0 403 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 ADGRF3Q8IZF5 1079 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 ABCA7Q8IZY2 2146 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 OR9I1Q8NGQ6 314 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 NELL1Q92832 810 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 KLHL29Q96CT2 875 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 ELOVL6Q9H5J4 265 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 TAC3Q9UHF0 121 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 TMEM131Q92545 1883 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 CFAP73A6NFT4 308 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 B2RBV5 119 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 FOXE1O00358 373 aaPredicted RBP12.25□□□□□ -0.45
TRIM39-204ENST00000396548 ETHE1O95571 254 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 HSD3B1P14060 373 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 HSD3B2P26439 372 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 IL12AP29459 219 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 RASSF2P50749 326 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 SGO1Q5FBB7 561 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 MIER2Q8N344 545 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 CMTM7Q96FZ5 175 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 C1orf50Q9BV19 199 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 RHBGQ9H310 441 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 CUEDC1Q9NWM3 386 aaPredicted RBP12.25□□□□□ -0.45
TRIM39-204ENST00000396548 C1orf109Q9NX04 203 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 PPT2Q9UMR5 302 aa12.25□□□□□ -0.45
TRIM39-204ENST00000396548 ARHGEF17Q96PE2 2063 aaPredicted RBP12.25□□□□□ -0.45
TRIM39-204ENST00000396548 LOC100653049A0A140TA62 436 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 GSC2O15499 205 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 KRT34O76011 436 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 KRT16P08779 473 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 JUNDP17535 347 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 BLKP51451 505 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 TBL3Q12788 808 aaKnown RBP12.24□□□□□ -0.45
TRIM39-204ENST00000396548 LAPTM5Q13571 262 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 CYLC2Q14093 348 aaPredicted RBP12.24□□□□□ -0.45
TRIM39-204ENST00000396548 SLBPQ14493 270 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRIM39-204ENST00000396548 NR6A1Q15406 480 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 C10orf62Q5T681 223 aaPredicted RBP12.24□□□□□ -0.45
TRIM39-204ENST00000396548 MED27Q6P2C8 311 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 MYLK4Q86YV6 388 aaPredicted RBP12.24□□□□□ -0.45
TRIM39-204ENST00000396548 TMEM105Q8N8V8 129 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 FNDC5Q8NAU1 212 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 HUS1BQ8NHY5 278 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 PROKR1Q8TCW9 393 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 PATE1Q8WXA2 126 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 SLC45A3Q96JT2 553 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 NT5DC2Q9H857 520 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 LRTM1Q9HBL6 345 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 SIRT5Q9NXA8 310 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 SPHK1Q9NYA1 384 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 APOBEC3BQ9UH17 382 aaKnown RBP12.24□□□□□ -0.45
TRIM39-204ENST00000396548 TMEM221A6NGB7 291 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 M0R296 226 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 G6PDP11413 515 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 AMD1P17707 334 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 ITGAXP20702 1163 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 REEP5Q00765 189 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 PRDX1Q06830 199 aaKnown RBP12.24□□□□□ -0.45
TRIM39-204ENST00000396548 ICE2Q659A1 982 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 C8orf82Q6P1X6 216 aaPredicted RBP12.24□□□□□ -0.45
TRIM39-204ENST00000396548 BLOC1S3Q6QNY0 202 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 LONP2Q86WA8 852 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 C17orf82Q86X59 251 aaPredicted RBP12.24□□□□□ -0.45
TRIM39-204ENST00000396548 ZNF740Q8NDX6 193 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 APIPQ96GX9 242 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 SLC6A20Q9NP91 592 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 NOP53Q9NZM5 478 aaKnown RBP12.24□□□□□ -0.45
TRIM39-204ENST00000396548 OR6C2Q9NZP2 312 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 ZIM2Q9NZV7 527 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 CACNA1IQ9P0X4 2223 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 KIR2DS5A0A0G2JLQ3 304 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 A0A0G2JNG1 304 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 MAGEB17A8MXT2 336 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 KIR2DS3K7RE56 304 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 SHMT2P34897 504 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 UFM1P61960 85 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 KIR2DS5Q14953 304 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 AGKQ53H12 422 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 AMIGO1Q86WK6 493 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 C1orf210Q8IVY1 113 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 RAB42Q8N4Z0 105 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 METTL2AQ96IZ6 378 aaKnown RBP12.24□□□□□ -0.45
TRIM39-204ENST00000396548 PITHD1Q9GZP4 211 aaPredicted RBP12.24□□□□□ -0.45
TRIM39-204ENST00000396548 POT1Q9NUX5 634 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 PCDHB11Q9Y5F2 797 aa12.24□□□□□ -0.45
TRIM39-204ENST00000396548 SNRNP200O75643 2136 aaKnown RBP12.23□□□□□ -0.45
TRIM39-204ENST00000396548 ASPDHA6ND91 283 aa12.23□□□□□ -0.45
TRIM39-204ENST00000396548 BTN3A3O00478 584 aa12.23□□□□□ -0.45
TRIM39-204ENST00000396548 KLHL18O94889 574 aa12.23□□□□□ -0.45
TRIM39-204ENST00000396548 CHRM5P08912 532 aaPredicted RBP12.23□□□□□ -0.45
TRIM39-204ENST00000396548 CSNK1G2P78368 415 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms