RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 UBAP2LQ14157 1087 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 TJAP1Q5JTD0 557 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 TMEM26Q6ZUK4 368 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF534Q76KX8 674 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 SLC9B2Q86UD5 537 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 TMEM25Q86YD3 366 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 ART5Q96L15 291 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 RAPGEFL1Q9UHV5 662 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 GSTK1Q9Y2Q3 226 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 HEATR5AQ86XA9 2040 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 ATXN1LP0C7T5 689 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 HSD17B1P14061 328 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 JUPP14923 745 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 ALDH9A1P49189 494 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 MVKQ03426 396 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 MPP2Q14168 576 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 CHST15Q7LFX5 561 aaPredicted RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 SERPINA11Q86U17 422 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 FAM217AQ8IXS0 508 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 ASB11Q8WXH4 323 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 AP3S1Q92572 193 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 APOLD1Q96LR9 279 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 ASB16Q96NS5 453 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 TSSK3Q96PN8 268 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 MTERF1Q99551 399 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 WDR55Q9H6Y2 383 aaPredicted RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 CACNG4Q9UBN1 327 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 SNX8Q9Y5X2 465 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 TLN2Q9Y4G6 2542 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 SONP18583 2426 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 NPEPPSL1A6NEC2 478 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 UGT2B11O75310 529 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 IL1RNP18510 177 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 GSTM3P21266 225 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 EIPR1Q53HC9 387 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 TCTE1Q5JU00 501 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 ATXN7L2Q5T6C5 722 aaPredicted RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 GKN2Q86XP6 184 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 SLC44A2Q8IWA5 706 aaPredicted RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 AGAP11Q8TF27 550 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 MRPS30Q9NP92 439 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 ERGIC3Q9Y282 383 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 MYO1GB0I1T2 1018 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 MPSTP25325 297 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 PSMA1P25786 263 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 TUBA4AP68366 448 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 FCHO2Q0JRZ9 810 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 NR1D2Q14995 579 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 TMEM240Q5SV17 173 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 NPAS3Q8IXF0 933 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 OR4F6Q8NGB9 312 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 PYDC1Q8WXC3 89 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 FIG4Q92562 907 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 PHF21AQ96BD5 680 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 DTD2Q96FN9 168 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 REXO5Q96IC2 774 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 CEP19Q96LK0 163 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 C12orf66Q96MD2 445 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 FCRL3Q96P31 734 aaPredicted RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 TIMM29Q9BSF4 260 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 CADM1Q9BY67 442 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 SRMSQ9H3Y6 488 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 HMG20AQ9NP66 347 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 TIMMDC1Q9NPL8 285 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 COPS7AQ9UBW8 275 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 PPIL1Q9Y3C6 166 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 H3BN98 237 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 TNFRSF10CO14798 259 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 SLC31A1O15431 190 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 EEDO75530 441 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 LINC00032P0C843 101 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 SP100P23497 879 aaPredicted RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 IL18R1Q13478 541 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 SYT16Q17RD7 645 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 CLEC6AQ6EIG7 209 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 ASRGL1Q7L266 308 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 CIR1Q86X95 450 aaPredicted RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 ACVR1CQ8NER5 493 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 ECHDC3Q96DC8 303 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 AURKBQ96GD4 344 aaPredicted RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 MAELQ96JY0 434 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 SLC17A9Q9BYT1 436 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 ATXN10Q9UBB4 475 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 DGKBQ9Y6T7 804 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 CLIC1O00299 241 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 PDPK1O15530 556 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 PCDH7O60245 1069 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 RFPL2O75678 378 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 UGT2B17O75795 530 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 MT-CO1P00395 513 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 AHRP35869 848 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 PSMD8P48556 350 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 CLCNKAP51800 687 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 DEFB103AP81534 67 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 LIPEQ05469 1076 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 GRM2Q14416 872 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 C9orf64Q5T6V5 341 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 AP1ARQ63HQ0 302 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 CARFQ8N187 725 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 DPP10Q8N608 796 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms